CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_041810
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_041810
T201633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY33995
GRAS
330
701
LWSLLTQCAQAVTINDQRTANELLKQISQHSSASGDGTQRLAHYFANALKTRLAGNGAPSYLPLLSNRTSAADVLKAYGVYVLACPFKKMSNFYANKKIMEVAEKATTLHIVDFGICYGFQWPCLIQRLSARANGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFQVPFEYNVIAKKWETIQLEELKIDKDEVVVVNCMYRLKNLPDDTVAPTSARDTVLKLIRSINPQLFIHGAANGTYNAPFFVTRFREALFHFSAQFDIFEANVSREDPQRMMFEKEVIGRDIMNVIACEGTERVERPETYKQWQSRTKRAGFKQVPLDQELLKKVTNMVRSSYHRDFVVDVDGRWMLQGWKGRVIYALTCWK
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000717
Prunus mume
Pm000717
N
0.700
SapurV1A.0041s0200
Salix purpurea
SapurV1A.0041s0200
N
0.708
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.733
Gorai.009G098100
Gossypium raimondii
Gorai.009G098100
N
0.884
Gorai.004G005200
Gossypium raimondii
Gorai.004G005200
N
0.780
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.873
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.736
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.746
cassava34368.m1
Manihot esculenta
cassava34368.m1
N
0.703
28650.m000187
Ricinus communis
28650.m000187
N
0.735
POPTR_0001s24890
Populus trichocarpa
POPTR_0001s24890
N
0.716
Pm000716
Prunus mume
Pm000716
N
0.700
Pm000712
Prunus mume
Pm000712
N
0.705
Traes_5AL_9AE0ED26A
Triticum aestivum
Traes_5AL_9AE0ED26A
N
0.730
PRUPE_ppa021807mg
Prunus persica
PRUPE_ppa021807mg
N
0.708
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.700
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.700
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.703
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.727