CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK13108.1
(
Cannabis sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
PK13108.1
T203238_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK13108.1
GRAS
265
635
LFKALIDCARLTEAEPERAVKSLIKLKESVSEQGDPTERVTFHFAEALYNRVSLPAEKSCSAIYESASSEDFTLPYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRPTGKPTKIRLSGIPALALGRTPAASLVATGNRLSEFAKLLELNFVFEPILIPISELNESSFRVEEDEVLAVNFMLQLYNLLDETPMAVHTALRLAKSLNPKIVTLGEYEASLNQVGFMTRFKNALKYYTAVFESLEPNLSRESPERLQVERVLFGRRIGCVVGPEDPRTKRERMEDRKEWKALMEGCEFQPVKLSHYAVSQAKILLWNYNYSSLFSLVESSPAFLSLAWNDVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Cannabis sativa
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf021185m
Mimulus guttatus
mgf021185m
N
0.707
SapurV1A.4211s0010
Salix purpurea
SapurV1A.4211s0010
N
0.727
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.736
SapurV1A.0254s0130
Salix purpurea
SapurV1A.0254s0130
N
0.727
MDP0000575908
Malus domestica
MDP0000575908
N
0.751
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.714
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.722
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.741
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.742
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.748
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.751
Eucgr.I02451
Eucalyptus grandis
Eucgr.I02451
N
0.702
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.701
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.719
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.721
Cucsa.127390
Cucumis sativus
Cucsa.127390
N
0.719
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.747
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.747
29634.m002156
Ricinus communis
29634.m002156
N
0.761
Pm026616
Prunus mume
Pm026616
N
0.757
Cla014744
Citrullus lanatus
Cla014744
N
0.726
Cla014426
Citrullus lanatus
Cla014426
N
0.703
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.716
TCM_000399
Theobroma cacao
TCM_000399
N
0.760
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.760
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.718