PK25954.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK25954.1 T247398_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK25954.1 LOB 11 33

Links

Other LOB family TFs
Other Cannabis sativa TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.783
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.783
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.870
LBD40 Arabidopsis thaliana AT1G67100 N 0.783
LBD41 Arabidopsis thaliana AT3G02550 N 0.783
LBD38 Arabidopsis thaliana AT3G49940 N 0.783
LBD39 Arabidopsis thaliana AT4G37540 N 0.826
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.783
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.739
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.826
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.870
Bo1g003550 Brassica oleracea Bo1g003550 N 0.826
Bo1g156310 Brassica oleracea Bo1g156310 N 0.739
Bo2g168020 Brassica oleracea Bo2g168020 N 0.783
Bo3g055690 Brassica oleracea Bo3g055690 N 0.739
Bo7g063630 Brassica oleracea Bo7g063630 N 0.783
Bo7g099150 Brassica oleracea Bo7g099150 N 0.783
Bo7g118580 Brassica oleracea Bo7g118580 N 0.826
Bo8g079200 Brassica oleracea Bo8g079200 N 0.783
Bo9g018500 Brassica oleracea Bo9g018500 N 0.783
Bra012164 Brassica rapa Bra012164 N 0.783
Bra012913 Brassica rapa Bra012913 N 0.783
Bra017831 Brassica rapa Bra017831 N 0.783
Bra021433 Brassica rapa Bra021433 N 0.739
Bra031833 Brassica rapa Bra031833 N 0.783
Bra036040 Brassica rapa Bra036040 N 0.783
Bra037847 Brassica rapa Bra037847 N 0.783
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N 0.783
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.783
GLYMA04G04750 Glycine max GLYMA04G04750 N 0.783
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.783
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.783
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.783
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.826
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.826
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.783
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.783
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.783
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.739
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.870
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.739
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.739
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.739
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.739
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N 0.739
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N 0.739
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.870
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.783
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.739
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.739
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.783
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.826
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.739
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.739
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.783
LPERR07G17890 Leersia perrieri LPERR07G17890 N 0.870
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.739
MLOC_58304 Hordeum vulgare MLOC_58304 N 0.783
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.826
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.826
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.783
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.783
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.783
OB01G27020 Oryza brachyantha OB01G27020 N 0.783
OB03G33950 Oryza brachyantha OB03G33950 N 0.739
OB07G26250 Oryza brachyantha OB07G26250 N 0.870
OBART01G17510 Oryza barthii OBART01G17510 N 0.783
OBART03G22820 Oryza barthii OBART03G22820 N 0.826
OBART03G25820 Oryza barthii OBART03G25820 N 0.739
OBART07G20600 Oryza barthii OBART07G20600 N 0.870
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.783
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.739
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.870
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.739
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.826
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.783
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.826
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.870
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.783
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.826
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.739
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.870
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.783
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.826
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.739
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.870
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.870
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.826
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.739
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.870
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.783
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.826
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.739
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.870
OS01G0511000 Oryza sativa OS01G0511000 N 0.783
OS03G0445700 Oryza sativa OS03G0445700 N 0.826
OS03G0609500 Oryza sativa OS03G0609500 N 0.739
OS07G0589000 Oryza sativa OS07G0589000 N 0.870
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.783
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N 0.783
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.783
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.783
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.913
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.783
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.783
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.826
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.826
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.739
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.783
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.913
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.870
Sb01g014800 Sorghum bicolor Sb01g014800 N 0.739
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.739
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.783
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.826
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.783
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.783
Si002412m.g Setaria italica Si002412m.g N 0.739
Si004887m.g Setaria italica Si004887m.g N 0.739
Si022660m.g Setaria italica Si022660m.g N 0.739
Si037275m.g Setaria italica Si037275m.g N 0.739
Si037346m.g Setaria italica Si037346m.g N 0.870
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.783
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N 0.783
TCM_000766 Theobroma cacao TCM_000766 N 0.826
TCM_007211 Theobroma cacao TCM_007211 N 0.783
TCM_009888 Theobroma cacao TCM_009888 N 0.783
TCM_012338 Theobroma cacao TCM_012338 N 0.739
TCM_019459 Theobroma cacao TCM_019459 N 0.783
TCM_034722 Theobroma cacao TCM_034722 N 0.870
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N 0.783
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.783
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N 0.783
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.826
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N 0.783
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.739
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.739
Traes_4AL_7241716B6 Triticum aestivum Traes_4AL_7241716B6 N 0.739
TRIUR3_28321 Triticum urartu TRIUR3_28321 N 0.739
TRIUR3_33679 Triticum urartu TRIUR3_33679 N 0.783
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.783
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.826
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.783
Ca_02208 Cicer arietinum Ca_02208 N 0.826
Ca_09342 Cicer arietinum Ca_09342 N 0.783
Cla007208 Citrullus lanatus Cla007208 N 0.783
Cla014228 Citrullus lanatus Cla014228 N 0.826
Cla019264 Citrullus lanatus Cla019264 N 0.783
Cla020920 Citrullus lanatus Cla020920 N 0.870
Pm002404 Prunus mume Pm002404 N 0.826
Pm005389 Prunus mume Pm005389 N 0.870
Pm015540 Prunus mume Pm015540 N 0.739
Pm021281 Prunus mume Pm021281 N 0.783
29661.m000902 Ricinus communis 29661.m000902 N 0.826
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.870
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.826
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.783
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.739
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.783
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.826
Cucsa.199060 Cucumis sativus Cucsa.199060 N 0.783
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.870
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.826
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.739
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.826
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.783
mgf007319m Mimulus guttatus mgf007319m N 0.739
mgf011656m Mimulus guttatus mgf011656m N 0.783
mgf017790m Mimulus guttatus mgf017790m N 0.783
mgf017960m Mimulus guttatus mgf017960m N 0.826
Aquca_017_00034 Aquilegia coerulea Aquca_017_00034 N 0.826
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.783
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.783
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.783
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.783
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.826
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.783
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.783
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.783
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.783
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.826
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.783
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.783
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.783
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.739
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.739
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.826
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.739
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N 0.739
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.783
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.826
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.783
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.913
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.739
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.826
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.913
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.739
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.783
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.739
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.739
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.739
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.739
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.870
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.826
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.870
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.826
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.826
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.826
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.826
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.739
MDP0000136037 Malus domestica MDP0000136037 N 0.739
MDP0000139025 Malus domestica MDP0000139025 N 0.783
MDP0000151330 Malus domestica MDP0000151330 N 0.739
MDP0000239820 Malus domestica MDP0000239820 N 0.739
MDP0000247079 Malus domestica MDP0000247079 N 0.783
MDP0000261146 Malus domestica MDP0000261146 N 0.783
MDP0000272600 Malus domestica MDP0000272600 N 0.783
MDP0000794101 Malus domestica MDP0000794101 N 0.826
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.739
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.826
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.739
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.739
Pavir.Ia01299 Panicum virgatum Pavir.Ia01299 N 0.739
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.870
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.739
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.783
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.826
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.783
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.826
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.870
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.870
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.870
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.783
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.783
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.826
PK03075.1 Cannabis sativa PK03075.1 N 0.826
PK03169.1 Cannabis sativa PK03169.1 N 0.739
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.826
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.826