GSMUA_Achr3G05880_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr3G05880_001 T249163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.814 0.625
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P05880_001 MADF 103 181

Links

Other MADF family TFs
Other Musa acuminata TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIL2 Arabidopsis thaliana AT3G14180 D 0.814
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.846
29814.m000741 Ricinus communis 29814.m000741 I 0.865
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.879
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.844
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.844
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.844
mgf000047m Mimulus guttatus mgf000047m I 0.813
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.846
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.859
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.814
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.814
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.814
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.844
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.846
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.844
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.886
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.844
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.858
MDP0000255104 Malus domestica MDP0000255104 I 0.886
MDP0000281471 Malus domestica MDP0000281471 I 0.886
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.844
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.846
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.878
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.867
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.814
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.861
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.877
Pm013209 Prunus mume Pm013209 I 0.886
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.859
Bo3g065930 Brassica oleracea Bo3g065930 I 0.846
Bo5g136850 Brassica oleracea Bo5g136850 I 0.861
Bo9g177060 Brassica oleracea Bo9g177060 I 0.813
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.814
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.844
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.846
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.960
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.874
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.887
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.825
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.819
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.867
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.886
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.873
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.859
29727.m000472 Ricinus communis 29727.m000472 I 0.859
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.819
Cla015773 Citrullus lanatus Cla015773 I 0.844
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.825
TCM_029209 Theobroma cacao TCM_029209 I 0.861
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.846
PK22475.1 Cannabis sativa PK22475.1 N 0.860
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.835
mgf001239m Mimulus guttatus mgf001239m N 0.857
MDP0000943251 Malus domestica MDP0000943251 N 0.829
Si010246m.g Setaria italica Si010246m.g N 0.821
MDP0000097759 Malus domestica MDP0000097759 N 0.846
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.904