POPTR_0002s14030 (Populus trichocarpa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 POPTR_0002s14030 T249663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s14030.1 MADF 54 137

Links

Other MADF family TFs
Other Populus trichocarpa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.928
29709.m001180 Ricinus communis 29709.m001180 N 0.970
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.944
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.847
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.930
mgf005560m Mimulus guttatus mgf005560m N 0.926
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.870
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.938
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.941
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.941
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.941
Cla021714 Citrullus lanatus Cla021714 N 0.930
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.922
Gorai.001G233700 Gossypium raimondii Gorai.001G233700 N 0.814
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.939
MDP0000158598 Malus domestica MDP0000158598 N 0.822
MDP0000557282 Malus domestica MDP0000557282 N 0.911
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.941
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.956
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.899
PK17306.1 Cannabis sativa PK17306.1 N 0.940
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.892
GSMUA_Achr11G17710_001 Musa acuminata GSMUA_Achr11G17710_001 N 0.829
Bo3g037360 Brassica oleracea Bo3g037360 N 0.943
Bo4g023990 Brassica oleracea Bo4g023990 N 0.924
Bra000360 Brassica rapa Bra000360 N 0.943
Bra004859 Brassica rapa Bra004859 N 0.894
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.938
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.899
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.869
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.917
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.851
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.851
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.938
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.903
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.877
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.838
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.955
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.848
TCM_005773 Theobroma cacao TCM_005773 N 0.941
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.941
Ca_06067 Cicer arietinum Ca_06067 N 0.915
Ca_06795 Cicer arietinum Ca_06795 N 0.899