TRIUR3_17292 (Triticum urartu)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TRIUR3_17292 T256659_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.771 0.771
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.771 0.771
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.750 0.750
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.750 0.750
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.750 0.750
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.750 0.750
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.750 0.750
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.750 0.750
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.750 0.750
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.750 0.750
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.750 0.750
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.750 0.750
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.729 0.729
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.729 0.729
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.729 0.729
Q8VWZ3_MALDO
M11025_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_02 		0.729 0.729
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.729 0.729
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.729 0.729
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.708 0.708
A1YJE4_HORVD
M10900_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM10_01 		0.708 0.708
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.708 0.708
MADS18
M10973_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS18_01 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
MAD55_ORYSJ
M10962_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS55_01 		0.708 0.708
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.708 0.708
Solyc05g012020.2
M10986_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_01 		0.708 0.708
Solyc05g012020.2
M10987_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2_01 		0.708 0.708
Solyc05g012020.2
M10988_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2 		0.708 0.708
Q4U0F1_WHEAT
M10978_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT2_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_17292-P1 MADS box 10 57

Links

Other MADS box family TFs
Other Triticum urartu TFs

825 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm013703 Prunus mume Pm013703 N 0.000
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.000
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.000
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.000
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.000
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.000
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.000
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.000
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.000
mgf025287m Mimulus guttatus mgf025287m N 0.000
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.000
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.000
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.000
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.000
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.000
TRIUR3_10927 Triticum urartu TRIUR3_10927 N 0.000
Traes_6DS_FC6D9CA6B Triticum aestivum Traes_6DS_FC6D9CA6B N 0.000
Traes_6AS_2B943BE9C Triticum aestivum Traes_6AS_2B943BE9C N 0.000
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.000
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.000
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.000
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.000
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.000
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.000
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.000
PK27100.1 Cannabis sativa PK27100.1 N 0.000
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.000
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.000
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.000
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.000
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.000
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.000
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.000
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.000
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.000
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.000
TCM_038144 Theobroma cacao TCM_038144 N 0.000
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.000
MDP0000394762 Malus domestica MDP0000394762 N 0.000
MDP0000197332 Malus domestica MDP0000197332 N 0.000
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.000
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.000
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.000
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.000
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.000
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.000
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.000
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.000
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.000
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.000
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.000
OB08G27850 Oryza brachyantha OB08G27850 N 0.000
OB08G27840 Oryza brachyantha OB08G27840 N 0.000
OB03G40190 Oryza brachyantha OB03G40190 N 0.000
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.000
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.000
MLOC_42818 Hordeum vulgare MLOC_42818 N 0.000
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.000
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.000
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.000
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.000
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.000
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.000
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.000
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.000
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.000
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.000
Bo4g137780 Brassica oleracea Bo4g137780 N 0.000
Bo4g107870 Brassica oleracea Bo4g107870 N 0.000
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.000
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.000
BGIOSGA009862 Oryza indica BGIOSGA009862 N 0.000
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.000
TCM_027266 Theobroma cacao TCM_027266 N 0.000
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.000
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.000
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.000
Si034159m.g Setaria italica Si034159m.g N 0.000
Si000761m.g Setaria italica Si000761m.g N 0.000
Si000431m.g Setaria italica Si000431m.g N 0.000
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.000
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.000
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.000
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.000
HAT Arabidopsis thaliana AT3G42170 N 0.000
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.000
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.000
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.000
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.000
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.000
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.000
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.000
OS05G0583200 Oryza sativa OS05G0583200 N 0.000
OS03G0733400 Oryza sativa OS03G0733400 N 0.000
ORGLA05G0237000 Oryza glaberrima ORGLA05G0237000 N 0.000