Bo1g144510 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g144510 T267114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.794 0.864
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.710 0.771
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.680 0.757
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.680 0.757
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g144510.1 Myb 112 158
Bo1g144510.1 Myb 164 210
Bo1g144510.1 Myb 216 261

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.000
mgf020234m Mimulus guttatus mgf020234m N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
Ciclev10012468m.g Citrus clementina Ciclev10012468m.g N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
Eucgr.A02637 Eucalyptus grandis Eucgr.A02637 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
gene15644-v1.0-hybrid Fragaria vesca gene15644-v1.0-hybrid N 0.000
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
Gorai.009G399900 Gossypium raimondii Gorai.009G399900 N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000252435 Malus domestica MDP0000252435 N 0.000
MDP0000252746 Malus domestica MDP0000252746 N 0.000
MDP0000506233 Malus domestica MDP0000506233 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
orange1.1g039532m.g Citrus sinensis orange1.1g039532m.g N 0.000
SapurV1A.0768s0010 Salix purpurea SapurV1A.0768s0010 N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
VIT_08s0007g02940 Vitis vinifera VIT_08s0007g02940 N 0.000
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.000
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
POPTR_0006s22580 Populus trichocarpa POPTR_0006s22580 N 0.000
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.000
POPTR_0016s07680 Populus trichocarpa POPTR_0016s07680 N 0.000
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
PRUPE_ppa025103mg Prunus persica PRUPE_ppa025103mg N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
TCM_022690 Theobroma cacao TCM_022690 N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
Cla008777 Citrullus lanatus Cla008777 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Cla018692 Citrullus lanatus Cla018692 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
28629.m000575 Ricinus communis 28629.m000575 N 0.000
30032.m000479 Ricinus communis 30032.m000479 N 0.000
30055.m001588 Ricinus communis 30055.m001588 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15680.m1 Manihot esculenta cassava15680.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava19207.valid.m1 Manihot esculenta cassava19207.valid.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
cassava3989.m1 Manihot esculenta cassava3989.m1 N 0.000