Carubv10000692m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10000692m.g T286204_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10000692m Myb 450 500

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL15 Arabidopsis thaliana AT3G57920 D
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D
Bostr.20903s0042 Boechera stricta Bostr.20903s0042 I
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I
mgf012995m Mimulus guttatus mgf012995m I
mgf001295m Mimulus guttatus mgf001295m I
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I
Cucsa.242790 Cucumis sativus Cucsa.242790 I
29269.m000250 Ricinus communis 29269.m000250 I
Pm007035 Prunus mume Pm007035 I
Pm002693 Prunus mume Pm002693 I
Ca_07299 Cicer arietinum Ca_07299 I
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I
TRIUR3_23872 Triticum urartu TRIUR3_23872 I
TCM_024873 Theobroma cacao TCM_024873 I
Si030195m.g Setaria italica Si030195m.g I
Si013870m.g Setaria italica Si013870m.g I
Sb07g027740 Sorghum bicolor Sb07g027740 I
Sb02g028420 Sorghum bicolor Sb02g028420 I
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I
PK18312.1 Cannabis sativa PK18312.1 I
Lus10016275.g Linum usitatissimum Lus10016275.g I
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I
Thhalv10006058m.g Eutrema salsugineum Thhalv10006058m.g I
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I
Pavir.J11258 Panicum virgatum Pavir.J11258 I
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I
MDP0000297978 Malus domestica MDP0000297978 I
Lus10023818.g Linum usitatissimum Lus10023818.g I
Lus10021034.g Linum usitatissimum Lus10021034.g I
Bostr.20903s0043 Boechera stricta Bostr.20903s0043 I
Lus10012020.g Linum usitatissimum Lus10012020.g I
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I
Carubv10017540m.g Capsella rubella Carubv10017540m.g I
Cagra.0686s0010 Capsella grandiflora Cagra.0686s0010 I
GLYMA02G30670 Glycine max GLYMA02G30670 I
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I
GRMZM2G307588 Zea mays GRMZM2G307588 I
GRMZM2G126018 Zea mays GRMZM2G126018 I
GLYMA19G32800 Glycine max GLYMA19G32800 I
GLYMA18G36960 Glycine max GLYMA18G36960 I
GLYMA03G29901 Glycine max GLYMA03G29901 I
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I
SPL15 Arabidopsis lyrata fgenesh2_kg.5__2235__AT3G57920.1 I
F775_10743 Aegilops tauschii F775_10743 I
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I
Bra014599 Brassica rapa Bra014599 I
Bra003305 Brassica rapa Bra003305 I
Bo6g073290 Brassica oleracea Bo6g073290 I
Bo4g109710 Brassica oleracea Bo4g109710 I
BGIOSGA029541 Oryza indica BGIOSGA029541 I
OGLUM09G15430 Oryza glumaepatula OGLUM09G15430 I
SPL14 Oryza sativa OS08G0509600 I
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I
OPUNC09G13250 Oryza punctata OPUNC09G13250 I
OPUNC08G18140 Oryza punctata OPUNC08G18140 I
ONIVA09G15400 Oryza nivara ONIVA09G15400 I
ONIVA08G22610 Oryza nivara ONIVA08G22610 I
OMERI09G11520 Oryza meridionalis OMERI09G11520 I
OS09G0491532 Oryza sativa OS09G0491532 I
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I
OBART09G14800 Oryza barthii OBART09G14800 I
OB08G26920 Oryza brachyantha OB08G26920 I
MTR_7g092930 Medicago truncatula MTR_7g092930 I
MTR_1g053715 Medicago truncatula MTR_1g053715 I
LPERR09G10900 Leersia perrieri LPERR09G10900 I
LPERR08G16940 Leersia perrieri LPERR08G16940 I
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I