Ciclev10029019m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10029019m.g T286663_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10029019m Myb 56 80
Ciclev10029019m Myb 86 131
Ciclev10029108m Myb 35 56
Ciclev10029108m Myb 62 107

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.701
MYB27 Arabidopsis thaliana AT3G53200 D 0.727
WER Arabidopsis thaliana AT5G14750 D 0.700
MYB24 Arabidopsis thaliana AT5G40350 D 0.770
MYB59 Arabidopsis thaliana AT5G59780 D 0.866
MYB114 Arabidopsis thaliana AT1G66380 I 0.682
MYB21 Arabidopsis thaliana AT3G27810 I 0.779
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.875
MYB86 Arabidopsis thaliana AT5G26660 I 0.726
TT2 Arabidopsis thaliana AT5G35550 I 0.736
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.719
BRADI2G11080 Brachypodium distachyon BRADI2G11080 I 0.694
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.683
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.720
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.726
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.813
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.734
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.695
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.734
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.769
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.671
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.856
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.862
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.691
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.697
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.729
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.737
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.813
TCM_005371 Theobroma cacao TCM_005371 I 0.730
TCM_021433 Theobroma cacao TCM_021433 I 0.776
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.732
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.849
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.871
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.871
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.714
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.698
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.870
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.710
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.732
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.909
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.727
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.720
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.755
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.752
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.727
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.826
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.722
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.731
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.826
SapurV1A.1387s0090 Salix purpurea SapurV1A.1387s0090 I 0.710
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.866
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.680
BGIOSGA002307 Oryza indica BGIOSGA002307 N 0.682
BGIOSGA013008 Oryza indica BGIOSGA013008 N 0.725
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.717
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.732
Bo2g011790 Brassica oleracea Bo2g011790 N 0.681
Bo3g017760 Brassica oleracea Bo3g017760 N 0.795
Bo5g131980 Brassica oleracea Bo5g131980 N 0.710
Bra009910 Brassica rapa Bra009910 N 0.710
Bra031041 Brassica rapa Bra031041 N 0.673
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.786
F775_22650 Aegilops tauschii F775_22650 N 0.753
F775_32151 Aegilops tauschii F775_32151 N 0.690
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.664
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.678
OBART12G16130 Oryza barthii OBART12G16130 N 0.813
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.813
OLONG_004747 Oryza longistaminata OLONG_004747 N 0.675
ORGLA01G0040600 Oryza glaberrima ORGLA01G0040600 N 0.662
OS01G0975300 Oryza sativa OS01G0975300 N 0.789
Si003873m.g Setaria italica Si003873m.g N 0.787
Traes_2AL_E8C400686 Triticum aestivum Traes_2AL_E8C400686 N 0.679
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.763
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.675
Traes_2DS_EEE59C2E7 Triticum aestivum Traes_2DS_EEE59C2E7 N 0.671
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.700
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.822
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.752
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.822
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.822
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.711
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.744
VIT_02s0033g00460 Vitis vinifera VIT_02s0033g00460 N 0.661
30147.m013749 Ricinus communis 30147.m013749 N 0.740
cassava11833.valid.m1 Manihot esculenta cassava11833.valid.m1 N 0.803
mgf001247m Mimulus guttatus mgf001247m N 0.774
mgf009707m Mimulus guttatus mgf009707m N 0.835
mgf018110m Mimulus guttatus mgf018110m N 0.735
mgf021749m Mimulus guttatus mgf021749m N 0.730
mgf026463m Mimulus guttatus mgf026463m N 0.669
mgf026560m Mimulus guttatus mgf026560m N 0.688
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.861
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.682
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.866
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.676
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.699
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.816
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.736
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.851
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.732
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.748
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.866
MDP0000139931 Malus domestica MDP0000139931 N 0.763
MDP0000153773 Malus domestica MDP0000153773 N 0.719
MDP0000169874 Malus domestica MDP0000169874 N 0.763
MDP0000242612 Malus domestica MDP0000242612 N 0.673
MDP0000475808 Malus domestica MDP0000475808 N 0.739
orange1.1g038824m.g Citrus sinensis orange1.1g038824m.g N 0.663
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.708
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.770
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.757
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.666
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.778
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.699
PK27824.1 Cannabis sativa PK27824.1 N 0.871
LjSGA_148662.1 Lotus japonicus LjSGA_148662.1 N 0.683
PDK_20s1316381g001 Phoenix dactylifera PDK_20s1316381g001 N 0.683
PDK_20s1354851g002 Phoenix dactylifera PDK_20s1354851g002 N 0.710
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.736
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.661
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.734
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.690