orange1.1g044161m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g044161m.g T288922_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.693 0.677
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.688 0.720
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.688 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g044161m Myb 8 55
orange1.1g044161m Myb 61 106

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N
TCM_046875 Theobroma cacao TCM_046875 N
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N
TRIUR3_19251 Triticum urartu TRIUR3_19251 N
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N
30209.m001510 Ricinus communis 30209.m001510 N
Cucsa.032420 Cucumis sativus Cucsa.032420 N
mgf014854m Mimulus guttatus mgf014854m N
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N
Lus10013684.g Linum usitatissimum Lus10013684.g N
Lus10017944.g Linum usitatissimum Lus10017944.g N
MDP0000268133 Malus domestica MDP0000268133 N
MDP0000315095 Malus domestica MDP0000315095 N
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N
PK03811.1 Cannabis sativa PK03811.1 N
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N
MTR_8g061040 Medicago truncatula MTR_8g061040 N
BGIOSGA021223 Oryza indica BGIOSGA021223 N
Bo1g117640 Brassica oleracea Bo1g117640 N
Bo5g118650 Brassica oleracea Bo5g118650 N
Bra037587 Brassica rapa Bra037587 N
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N
GLYMA06G35561 Glycine max GLYMA06G35561 N
GLYMA12G18490 Glycine max GLYMA12G18490 N
GRMZM2G111204 Zea mays GRMZM2G111204 N
GRMZM2G126170 Zea mays GRMZM2G126170 N
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N
LPERR06G11990 Leersia perrieri LPERR06G11990 N
MLOC_61712 Hordeum vulgare MLOC_61712 N
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N
OBART06G15310 Oryza barthii OBART06G15310 N
OLONG_009303 Oryza longistaminata OLONG_009303 N
OLONG_009306 Oryza longistaminata OLONG_009306 N
OMERI06G16500 Oryza meridionalis OMERI06G16500 N
OPUNC06G13910 Oryza punctata OPUNC06G13910 N
OPUNC06G13990 Oryza punctata OPUNC06G13990 N
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N
OS06G0485100 Oryza sativa OS06G0485100 N
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N
Sb02g020940 Sorghum bicolor Sb02g020940 N