CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400031071
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400031071
T295166_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400079789
NAC/NAM
11
138
APGFRFHPTDEELVRYYLRRKIYGRTFKSDLISEIDIYKVEPWDLPGMSRLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRAVHRNKSQVVGMKKTLVYHNGRAPKGQRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL65
Arabidopsis thaliana
AT1G18750
D
0.000
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.000
Cla010361
Citrullus lanatus
Cla010361
I
0.000
Ciclev10020575m.g
Citrus clementina
Ciclev10020575m.g
I
0.000
Carubv10009419m.g
Capsella rubella
Carubv10009419m.g
I
0.000
Cagra.4153s0004
Capsella grandiflora
Cagra.4153s0004
I
0.000
Bostr.7128s0485
Boechera stricta
Bostr.7128s0485
I
0.000
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.000
mgf004425m
Mimulus guttatus
mgf004425m
I
0.000
mgf000945m
Mimulus guttatus
mgf000945m
I
0.000
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.000
Cucsa.112840
Cucumis sativus
Cucsa.112840
I
0.000
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.000
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.000
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.000
30138.m004061
Ricinus communis
30138.m004061
I
0.000
29813.m001508
Ricinus communis
29813.m001508
I
0.000
Pm024895
Prunus mume
Pm024895
I
0.000
Cla018884
Citrullus lanatus
Cla018884
I
0.000
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.000
orange1.1g017511m.g
Citrus sinensis
orange1.1g017511m.g
I
0.000
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.000
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.000
LjSGA_031058.2
Lotus japonicus
LjSGA_031058.2
I
0.000
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.000
PK21701.1
Cannabis sativa
PK21701.1
I
0.000
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.000
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.000
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.000
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.000
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.000
MDP0000193129
Malus domestica
MDP0000193129
I
0.000
MDP0000146231
Malus domestica
MDP0000146231
I
0.000
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.000
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.000
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.000
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.000
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.000
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.000
Bra016544
Brassica rapa
Bra016544
I
0.000
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.000
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.000
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.000
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.000
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.000
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.000
AGL65
Arabidopsis lyrata
fgenesh2_kg.1__2055__AT1G18750.1
I
0.000
F775_13266
Aegilops tauschii
F775_13266
I
0.000
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.000
Bra031049
Brassica rapa
Bra031049
I
0.000
Bra025685
Brassica rapa
Bra025685
I
0.000
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.000
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.000
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.000
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.000
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.000
Solyc03g115910.1
Solanum lycopersicum
Solyc03g115910.1
I
0.000
TCM_011687
Theobroma cacao
TCM_011687
I
0.000
TCM_014051
Theobroma cacao
TCM_014051
I
0.000
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.000
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.000
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.000
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.000
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.000
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.000
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.000
OBART11G21780
Oryza barthii
OBART11G21780
N
0.000
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.000
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.000
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.000
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.000
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.000
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.000
OS11G0658700
Oryza sativa
OS11G0658700
N
0.000
PGSC0003DMG400019525
Solanum tuberosum
PGSC0003DMG400019525
N
0.000
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.000
Si028357m.g
Setaria italica
Si028357m.g
N
0.000