AGL65 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_17s0000g06340 T256812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_17s0000g06340.t01 MADS box 10 57

Links

Other MADS box family TFs
Other Vitis vinifera TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.938
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.938
TCM_014051 Theobroma cacao TCM_014051 I 0.938
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.917
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.917
30138.m004061 Ricinus communis 30138.m004061 I 0.917
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.896
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.896
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.896
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.875
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.854
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.854
PK21701.1 Cannabis sativa PK21701.1 I 0.854
AGL65 Arabidopsis thaliana AT1G18750 D 0.854
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.833
MDP0000193129 Malus domestica MDP0000193129 I 0.833
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.833
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.833
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.833
Bra031049 Brassica rapa Bra031049 I 0.833
Bra016544 Brassica rapa Bra016544 I 0.833
Bo8g068060 Brassica oleracea Bo8g068060 I 0.833
Bo8g104060 Brassica oleracea Bo8g104060 I 0.833
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.812
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.812
Bra025685 Brassica rapa Bra025685 I 0.812
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.812
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.792
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.792
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.792
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.792
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.792
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.792
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.792
Pm024895 Prunus mume Pm024895 I 0.792
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.792
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.792
F775_13266 Aegilops tauschii F775_13266 I 0.792
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.792
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.792
mgf000945m Mimulus guttatus mgf000945m I 0.771
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.771
mgf004425m Mimulus guttatus mgf004425m I 0.771
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.771
Cla018884 Citrullus lanatus Cla018884 I 0.771
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.771
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.771
TCM_011687 Theobroma cacao TCM_011687 I 0.761
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.761
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.750
Cla010361 Citrullus lanatus Cla010361 I 0.750
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.750
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.750
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.739
PGSC0003DMG400019525 Solanum tuberosum PGSC0003DMG400019525 N 0.729
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.729
AGL66 Arabidopsis thaliana AT1G77980 I 0.729
MDP0000146231 Malus domestica MDP0000146231 I 0.729
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.729
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.729
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.729
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.729
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.729
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.729
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.717
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.717
29813.m001508 Ricinus communis 29813.m001508 I 0.717
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.708
MDP0000147667 Malus domestica MDP0000147667 I 0.708
Bo8g071330 Brassica oleracea Bo8g071330 I 0.708
Bo7g060150 Brassica oleracea Bo7g060150 I 0.708
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.708
OS11G0658700 Oryza sativa OS11G0658700 N 0.708
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.708
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.708
AGL104 Arabidopsis thaliana AT1G22130 I 0.708
Bra012308 Brassica rapa Bra012308 I 0.708
Si028357m.g Setaria italica Si028357m.g N 0.708
Bo6g121640 Brassica oleracea Bo6g121640 I 0.708
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.708
OB08G26170 Oryza brachyantha OB08G26170 I 0.708
Pm019181 Prunus mume Pm019181 I 0.708
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.708
29908.m005982 Ricinus communis 29908.m005982 I 0.708
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.708
Bostr.20129s0232 Boechera stricta Bostr.20129s0232 I 0.708
Ca_18082 Cicer arietinum Ca_18082 I 0.708
OBART11G21780 Oryza barthii OBART11G21780 N 0.708
Bra015643 Brassica rapa Bra015643 I 0.708
MTR_4g084740 Medicago truncatula MTR_4g084740 I 0.708
Bra016386 Brassica rapa Bra016386 I 0.708
Gorai.007G242000 Gossypium raimondii Gorai.007G242000 I 0.708
AGL104 Arabidopsis lyrata Al_scaffold_0001_2320 I 0.708
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.708