CJA04414 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA04414 T301939_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.953 0.671
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.755 0.700
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA04414 Nuclear receptor 61 130

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.755
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.953
L892_g8144 Steinernema scapterisci L892_g8144 I 0.826
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.931
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.918
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.828
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.827
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.772
L889_g9698 Steinernema feltiae L889_g9698 I 0.812
L889_g987 Steinernema feltiae L889_g987 I 0.812
L892_g10708 Steinernema scapterisci L892_g10708 I 0.772
L892_g8140 Steinernema scapterisci L892_g8140 I 0.845
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.828
L892_g8145 Steinernema scapterisci L892_g8145 I 0.840
L893_g2090 Steinernema glaseri L893_g2090 I 0.814
L893_g4569 Steinernema glaseri L893_g4569 I 0.840
L893_g9517 Steinernema glaseri L893_g9517 I 0.832
L898_g10723 Steinernema monticolum L898_g10723 I 0.810
L898_g28806 Steinernema monticolum L898_g28806 I 0.830
NECAME_01500 Necator americanus NECAME_01500 I 0.759
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.816
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.813
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.857
CBG03687 Caenorhabditis briggsae CBG03687 I 0.932
CRE07801 Caenorhabditis remanei CRE07801 I 0.783
CBG03688 Caenorhabditis briggsae CBG03688 I 0.918
CBG12152 Caenorhabditis briggsae CBG12152 I 0.958
CBG16375 Caenorhabditis briggsae CBG16375 I 0.922
CBG20699 Caenorhabditis briggsae CBG20699 I 0.753
CBN03440 Caenorhabditis brenneri CBN03440 I 0.860
CBN03769 Caenorhabditis brenneri CBN03769 I 0.937
CBN04619 Caenorhabditis brenneri CBN04619 I 0.923
CBN16902 Caenorhabditis brenneri CBN16902 I 0.964
CBN24070 Caenorhabditis brenneri CBN24070 I 0.912
CJA07390 Caenorhabditis japonica CJA07390 I 0.991
CJA10576 Caenorhabditis japonica CJA10576 I 0.906
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.932
CRE17310 Caenorhabditis remanei CRE17310 I 0.919
CRE17354 Caenorhabditis remanei CRE17354 I 0.878
CRE17355 Caenorhabditis remanei CRE17355 I 0.932
CRE18529 Caenorhabditis remanei CRE18529 I 0.960
CRE27174 Caenorhabditis remanei CRE27174 I 0.959
CRE27659 Caenorhabditis remanei CRE27659 I 0.939
PPA08785 Pristionchus pacificus PPA08785 I 0.816
PPA10478 Pristionchus pacificus PPA10478 I 0.813
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.955
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.804
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N 0.806
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.763