nhr-53 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003643 T306167_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.772 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
K06B4.11 Nuclear receptor 21 90

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.772
L889_g10781 Steinernema feltiae L889_g10781 I 0.871
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.836
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.757
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.785
Minc14668 Meloidogyne incognita Minc14668 I 0.791
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.779
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.816
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.746
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.814
CBG12152 Caenorhabditis briggsae CBG12152 I 0.768
L892_g8144 Steinernema scapterisci L892_g8144 I 0.815
L892_g8145 Steinernema scapterisci L892_g8145 I 0.785
L893_g2090 Steinernema glaseri L893_g2090 I 0.797
L893_g4569 Steinernema glaseri L893_g4569 I 0.788
L898_g28806 Steinernema monticolum L898_g28806 I 0.814
L898_g9580 Steinernema monticolum L898_g9580 I 0.829
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.784
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.805
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.750
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.786
CBG04789 Caenorhabditis briggsae CBG04789 I 0.983
CBG16375 Caenorhabditis briggsae CBG16375 I 0.840
CBG20699 Caenorhabditis briggsae CBG20699 I 0.774
CBN03769 Caenorhabditis brenneri CBN03769 I 0.789
CBN04619 Caenorhabditis brenneri CBN04619 I 0.771
CBN16902 Caenorhabditis brenneri CBN16902 I 0.792
CBN18264 Caenorhabditis brenneri CBN18264 I 0.981
CJA10576 Caenorhabditis japonica CJA10576 I 0.853
CRE07801 Caenorhabditis remanei CRE07801 I 0.772
CRE09011 Caenorhabditis remanei CRE09011 I 0.983
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.750
CRE18529 Caenorhabditis remanei CRE18529 I 0.771
CRE27174 Caenorhabditis remanei CRE27174 I 0.765
PPA29361 Pristionchus pacificus PPA29361 I 0.768
CRE27659 Caenorhabditis remanei CRE27659 I 0.787
CBN15963 Caenorhabditis brenneri CBN15963 N 0.802
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.851
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.808
CBG17366 Caenorhabditis briggsae CBG17366 N 0.839
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.829
CRE27175 Caenorhabditis remanei CRE27175 N 0.822
L893_g3450 Steinernema glaseri L893_g3450 N 0.819
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.839
L892_g8146 Steinernema scapterisci L892_g8146 N 0.798
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.870
ASU_03038 Ascaris suum ASU_03038 N 0.800
L889_g16048 Steinernema feltiae L889_g16048 N 0.795
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.787
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.831
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.831