HPLM_0000308401 (Haemonchus placei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPLM_0000308401 T308889_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.895 0.629
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.765 0.529
Hnf4
M03935_2.00 		Drosophila melanogaster
RGGKCAAAGGTCA
TGACCTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_1 		0.761 0.629
Hnf4
M03936_2.00 		Drosophila melanogaster
RGGKCAAAGTYCA
TGRACTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_2 		0.761 0.629
Hnf4
M03937_2.00 		Drosophila melanogaster
RGTVCAAAGKTCR
YGAMCTTTGBACY		 SELEX
Nitta et al.(2015)
Hnf4_3 		0.761 0.629
Hnf4
M03938_2.00 		Drosophila melanogaster
RTGRACTTTGGACY
RGTCCAAAGTYCAY		 SELEX
Nitta et al.(2015)
Hnf4_4 		0.761 0.629
Hnf4
M06428_2.00 		Drosophila melanogaster
DKNKWSSNGGGGTCA
TGACCCCNSSWMNMH		 B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914 		0.761 0.629
Hnf4
M06429_2.00 		Drosophila melanogaster
GGGGTCAH
DTGACCCC		 B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914 		0.761 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0000308401-mRNA-1 Nuclear receptor 17 86

Links

Other Nuclear receptor family TFs
Other Haemonchus placei TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hnf4 Drosophila melanogaster FBgn0004914 D 0.761
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.765
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.895
ACEP17779 Atta cephalotes ACEP17779 I 0.760
Bm4980 Brugia malayi Bm4980 I 0.884
Bm5457 Brugia malayi Bm5457 I 0.991
CapteG172322 Capitella teleta CapteG172322 I 0.758
CBG03466 Caenorhabditis briggsae CBG03466 I 0.808
CBG03844 Caenorhabditis briggsae CBG03844 I 0.895
CBG03860 Caenorhabditis briggsae CBG03860 I 0.859
CBG04240 Caenorhabditis briggsae CBG04240 I 0.792
CBG13142 Caenorhabditis briggsae CBG13142 I 0.848
CBG14485 Caenorhabditis briggsae CBG14485 I 0.793
CBG14996 Caenorhabditis briggsae CBG14996 I 0.746
CBG22587 Caenorhabditis briggsae CBG22587 I 0.769
CBG22776 Caenorhabditis briggsae CBG22776 I 0.991
CBN00088 Caenorhabditis brenneri CBN00088 I 0.813
CBN04415 Caenorhabditis brenneri CBN04415 I 0.848
CBN05776 Caenorhabditis brenneri CBN05776 I 0.859
CBN08474 Caenorhabditis brenneri CBN08474 I 0.991
CBN11572 Caenorhabditis brenneri CBN11572 I 0.799
CBN18198 Caenorhabditis brenneri CBN18198 I 0.895
CBN20749 Caenorhabditis brenneri CBN20749 I 0.895
CBN21958 Caenorhabditis brenneri CBN21958 I 0.813
CBN28641 Caenorhabditis brenneri CBN28641 I 0.808
CBN32300 Caenorhabditis brenneri CBN32300 I 0.848
CJA02727 Caenorhabditis japonica CJA02727 I 0.853
CJA06107 Caenorhabditis japonica CJA06107 I 0.801
CJA14035 Caenorhabditis japonica CJA14035 I 0.991
CJA14248 Caenorhabditis japonica CJA14248 I 0.750
CJA14611 Caenorhabditis japonica CJA14611 I 0.808
CJA16040 Caenorhabditis japonica CJA16040 I 0.793
CJA19445 Caenorhabditis japonica CJA19445 I 0.859
CRE00809 Caenorhabditis remanei CRE00809 I 0.793
CRE07033 Caenorhabditis remanei CRE07033 I 0.769
CRE08259 Caenorhabditis remanei CRE08259 I 0.895
CRE08264 Caenorhabditis remanei CRE08264 I 0.859
CRE10779 Caenorhabditis remanei CRE10779 I 0.769
CRE21925 Caenorhabditis remanei CRE21925 I 0.991
CRE24933 Caenorhabditis remanei CRE24933 I 0.797
CRE26423 Caenorhabditis remanei CRE26423 I 0.848
CRE29874 Caenorhabditis remanei CRE29874 I 0.808
ENSCING00000009566 Ciona intestinalis ENSCING00000009566 I 0.759
ENSCSAVG00000009430 Ciona savignyi ENSCSAVG00000009430 I 0.759
CABZ01057488.2 Danio rerio ENSDARG00000104742 I 0.753
ENSETEG00000011451 Echinops telfairi ENSETEG00000011451 I 0.751
ENSGMOG00000001972 Gadus morhua ENSGMOG00000001972 I 0.788
ENSLOCG00000004238 Lepisosteus oculatus ENSLOCG00000004238 I 0.747
ENSONIG00000005911 Oreochromis niloticus ENSONIG00000005911 I 0.753
ENSPFOG00000001827 Poecilia formosa ENSPFOG00000001827 I 0.786
ENSXMAG00000007901 Xiphophorus maculatus ENSXMAG00000007901 I 0.761
GA21689 Drosophila pseudoobscura FBgn0081674 I 0.761
GF14359 Drosophila ananassae FBgn0091386 I 0.761
GG24056 Drosophila erecta FBgn0116195 I 0.761
GH13232 Drosophila grimshawi FBgn0120709 I 0.761
GI12430 Drosophila mojavensis FBgn0135187 I 0.761
GL26219 Drosophila persimilis FBgn0163801 I 0.761
GM12759 Drosophila sechellia FBgn0167695 I 0.761
GD22387 Drosophila simulans FBgn0193793 I 0.761
GJ17882 Drosophila virilis FBgn0205050 I 0.761
GK18664 Drosophila willistoni FBgn0220662 I 0.761
GE10817 Drosophila yakuba FBgn0228657 I 0.761
GB45602 Apis mellifera GB45602 I 0.753
HelroG67417 Helobdella robusta HelroG67417 I 0.792
LOAG_07549 Loa loa LOAG_07549 I 0.991
LOAG_08615 Loa loa LOAG_08615 I 0.896
PHUM477600 Pediculus humanus PHUM477600 I 0.761
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.992
PPA22443 Pristionchus pacificus PPA22443 I 0.758
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.789
SINV18643 Solenopsis invicta SINV18643 I 0.760
SMAR014405 Strigamia maritima SMAR014405 I 0.840
SPU_021192 Strongylocentrotus purpuratus SPU_021192 I 0.761
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.808
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.991
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.857
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.799
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.801
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.859
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.801
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.896
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.991
Hsal_12926--NP_001011634.1_APIME Harpegnathos saltator Hsal_12926--NP_001011634.1_APIME I 0.761
Ocbimv22001693m.g Octopus bimaculoides Ocbimv22001693m.g I 0.756
LCUP010047 Lucilia cuprina LCUP010047 I 0.761
SMU15037562 Schmidtea mediterranea SMU15037562 I 0.756
Minc11307 Meloidogyne incognita Minc11307 I 0.954
XP_002159483.1 Hydra magnipapillata XP_002159483.1 I 0.778
BGLB013485 Biomphalaria glabrata BGLB013485 I 0.788
MDOA009609 Musca domestica MDOA009609 I 0.761
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.774
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.808
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.808
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.991
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.774
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.774
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.774
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.990
ASU_00971 Ascaris suum ASU_00971 I 0.752
ASU_03870 Ascaris suum ASU_03870 I 0.895
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.884
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.991
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.787
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.759
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.989
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.868
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.844
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.778
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.991
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.774
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.808
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.775
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.878
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.991
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.752
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.783
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.789
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.970
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.896
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.859
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.808
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.774
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.808
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.774
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.859
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.859
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.991
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.859
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.808
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.859
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.874
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.745
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.790
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.911
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.992
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.808
L889_g15424 Steinernema feltiae L889_g15424 I 0.900
L889_g16305 Steinernema feltiae L889_g16305 I 0.792
L889_g17247 Steinernema feltiae L889_g17247 I 0.841
L889_g25097 Steinernema feltiae L889_g25097 I 0.992
L889_g31970 Steinernema feltiae L889_g31970 I 0.745
L889_g366 Steinernema feltiae L889_g366 I 0.781
L892_g17146 Steinernema scapterisci L892_g17146 I 0.790
L892_g17832 Steinernema scapterisci L892_g17832 I 0.808
L892_g186 Steinernema scapterisci L892_g186 I 0.992
L892_g3438 Steinernema scapterisci L892_g3438 I 0.910
L893_g13285 Steinernema glaseri L893_g13285 I 0.873
L893_g263 Steinernema glaseri L893_g263 I 0.745
L893_g33656 Steinernema glaseri L893_g33656 I 0.900
L893_g5404 Steinernema glaseri L893_g5404 I 0.781
L893_g6023 Steinernema glaseri L893_g6023 I 0.984
L893_g6565 Steinernema glaseri L893_g6565 I 0.792
L893_g6878 Steinernema glaseri L893_g6878 I 0.756
L898_g11608 Steinernema monticolum L898_g11608 I 0.745
L898_g18440 Steinernema monticolum L898_g18440 I 0.992
L898_g26357 Steinernema monticolum L898_g26357 I 0.841
L898_g5338 Steinernema monticolum L898_g5338 I 0.792
L898_g9613 Steinernema monticolum L898_g9613 I 0.900
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.955
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.991
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.774
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.991
NECAME_02375 Necator americanus NECAME_02375 I 0.774
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.991
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.896
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.991
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.991
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.991
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.895
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.839
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.750
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.842
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.883
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.988
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.956
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.758
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.992
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.751
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.766
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.752
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.861
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.752
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.989
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.839
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.988
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.842
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.746
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.746
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.839
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.988
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.842
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.746
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.842
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.988
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.839
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.774
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.991
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.897
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.990
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.774