CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCNE_0001270101
(
Toxocara canis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
TCNE_0001270101
T310795_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TCNE_0001270101-mRNA-1
Nuclear receptor
202
223
LLCAICGDKSSGLHYGIYTCEG
Links
Other
Nuclear receptor
family TFs
Other
Toxocara canis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla018594
Citrullus lanatus
Cla018594
N
chr1.CM0033.1120.nc
Lotus japonicus
chr1.CM0033.1120.nc
N
Thhalv10016472m.g
Eutrema salsugineum
Thhalv10016472m.g
N
orange1.1g008352m.g
Citrus sinensis
orange1.1g008352m.g
N
Gorai.009G415400
Gossypium raimondii
Gorai.009G415400
N
gene09615-v1.0-hybrid
Fragaria vesca
gene09615-v1.0-hybrid
N
evm.TU.supercontig_56.16
Carica papaya
evm.TU.supercontig_56.16
N
Eucgr.K01255
Eucalyptus grandis
Eucgr.K01255
N
Ciclev10011376m.g
Citrus clementina
Ciclev10011376m.g
N
Carubv10022939m.g
Capsella rubella
Carubv10022939m.g
N
Cagra.0558s0014
Capsella grandiflora
Cagra.0558s0014
N
Bostr.23794s0392
Boechera stricta
Bostr.23794s0392
N
Cucsa.124610
Cucumis sativus
Cucsa.124610
N
cassava35219.m1
Manihot esculenta
cassava35219.m1
N
30078.m002307
Ricinus communis
30078.m002307
N
Pm030137
Prunus mume
Pm030137
N
SIGF
Arabidopsis thaliana
AT2G36990
N
Ca_17153
Cicer arietinum
Ca_17153
N
SIGF
Vitis vinifera
VIT_08s0040g01560
N
TCM_022198
Theobroma cacao
TCM_022198
N
Solyc09g008040.2
Solanum lycopersicum
Solyc09g008040.2
N
PRUPE_ppa003513mg
Prunus persica
PRUPE_ppa003513mg
N
POPTR_0006s12760
Populus trichocarpa
POPTR_0006s12760
N
PGSC0003DMG400021553
Solanum tuberosum
PGSC0003DMG400021553
N
MTR_7g101840
Medicago truncatula
MTR_7g101840
N
GLYMA19G36710
Glycine max
GLYMA19G36710
N
GLYMA10G06500
Glycine max
GLYMA10G06500
N
GLYMA05G22730
Glycine max
GLYMA05G22730
N
GLYMA03G33970
Glycine max
GLYMA03G33970
N
SIGF
Arabidopsis lyrata
fgenesh2_kg.4__1742__AT2G36990.1
N
Bo4g186560
Brassica oleracea
Bo4g186560
N