Solyc07g054450.2 (Solanum lycopersicum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 Solyc07g054450.2 T322089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g054450.2.1 SAND 26 126

Links

Other SAND family TFs
Other Solanum lycopersicum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g090080 Medicago truncatula MTR_2g090080 N 0.871
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N 0.876
Thhalv10002089m.g Eutrema salsugineum Thhalv10002089m.g N 0.865
Carubv10014550m.g Capsella rubella Carubv10014550m.g N 0.870
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.943
Cagra.20132s0010 Capsella grandiflora Cagra.20132s0010 N 0.870
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.943
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.943
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.880
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N 0.991
OB05G29560 Oryza brachyantha OB05G29560 N 0.866
ULT2 Arabidopsis thaliana AT2G20825 N 0.883
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.922
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.919
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.910
Bra036504 Brassica rapa Bra036504 N 0.888
Bra026276 Brassica rapa Bra026276 N 0.906
Bra024219 Brassica rapa Bra024219 N 0.898
Bo7g111950 Brassica oleracea Bo7g111950 N 0.915
Bo1g051270 Brassica oleracea Bo1g051270 N 0.919
Bo00902s070 Brassica oleracea Bo00902s070 N 0.888
ULT1 Arabidopsis thaliana AT4G28190 N 0.903