VDBG_08091 (Verticillium albo atrum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 VDBG_08091 T323744_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_08091T0 Sigma 70 144 190

Links

Other Sigma 70 family TFs
Other Verticillium albo atrum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB111 Arabidopsis thaliana AT5G49330 D
PK06182.1 Cannabis sativa PK06182.1 D
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I
MYB8 Arabidopsis thaliana AT1G35515 I
MYB12 Arabidopsis thaliana AT2G47460 I
MYB11 Arabidopsis thaliana AT3G62610 I
MYB29 Arabidopsis thaliana AT5G07690 I
BGIOSGA003345 Oryza indica BGIOSGA003345 I
BGIOSGA010900 Oryza indica BGIOSGA010900 I
Bo3g039690 Brassica oleracea Bo3g039690 I
Bo3g044210 Brassica oleracea Bo3g044210 I
Bo4g004500 Brassica oleracea Bo4g004500 I
Bo7g092680 Brassica oleracea Bo7g092680 I
Bra000453 Brassica rapa Bra000453 I
Bra000680 Brassica rapa Bra000680 I
Bra036145 Brassica rapa Bra036145 I
Bra037419 Brassica rapa Bra037419 I
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I
F775_11235 Aegilops tauschii F775_11235 I
F775_18434 Aegilops tauschii F775_18434 I
F775_21522 Aegilops tauschii F775_21522 I
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I
GLYMA02G01740 Glycine max GLYMA02G01740 I
GLYMA03G37640 Glycine max GLYMA03G37640 I
GLYMA07G37142 Glycine max GLYMA07G37142 I
GLYMA09G04370 Glycine max GLYMA09G04370 I
GLYMA10G01801 Glycine max GLYMA10G01801 I
GLYMA15G15400 Glycine max GLYMA15G15400 I
GLYMA17G03480 Glycine max GLYMA17G03480 I
GLYMA19G40250 Glycine max GLYMA19G40250 I
GRMZM2G016020 Zea mays GRMZM2G016020 I
GRMZM2G022686 Zea mays GRMZM2G022686 I
GRMZM2G051256 Zea mays GRMZM2G051256 I
GRMZM2G051528 Zea mays GRMZM2G051528 I
GRMZM2G057027 Zea mays GRMZM2G057027 I
GRMZM2G129872 Zea mays GRMZM2G129872 I
GRMZM2G160838 Zea mays GRMZM2G160838 I
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I
LPERR03G12690 Leersia perrieri LPERR03G12690 I
LPERR06G00600 Leersia perrieri LPERR06G00600 I
MLOC_57220 Hordeum vulgare MLOC_57220 I
MTR_2g034790 Medicago truncatula MTR_2g034790 I
MTR_4g121460 Medicago truncatula MTR_4g121460 I
MTR_7g109320 Medicago truncatula MTR_7g109320 I
OB01G22640 Oryza brachyantha OB01G22640 I
OB03G24320 Oryza brachyantha OB03G24320 I
OB03G30160 Oryza brachyantha OB03G30160 I
OBART01G11800 Oryza barthii OBART01G11800 I
OBART03G14380 Oryza barthii OBART03G14380 I
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I
OMERI03G13130 Oryza meridionalis OMERI03G13130 I
ONIVA01G15380 Oryza nivara ONIVA01G15380 I
ONIVA03G15280 Oryza nivara ONIVA03G15280 I
OPUNC03G13890 Oryza punctata OPUNC03G13890 I
ORGLA01G0099200 Oryza glaberrima ORGLA01G0099200 I
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I
OS01G0305900 Oryza sativa OS01G0305900 I
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I
PGSC0003DMG400005848 Solanum tuberosum PGSC0003DMG400005848 I
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I
PGSC0003DMG401023433 Solanum tuberosum PGSC0003DMG401023433 I
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I
PRUPE_ppa018430mg Prunus persica PRUPE_ppa018430mg I
Sb01g037670 Sorghum bicolor Sb01g037670 I
Sb03g012550 Sorghum bicolor Sb03g012550 I
MYB111 Arabidopsis lyrata scaffold_801313.1 I
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I
Si002107m.g Setaria italica Si002107m.g I
Si039538m.g Setaria italica Si039538m.g I
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I
Solyc08g008480.2 Solanum lycopersicum Solyc08g008480.2 I
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I
TCM_004777 Theobroma cacao TCM_004777 I
TCM_010778 Theobroma cacao TCM_010778 I
TCM_011660 Theobroma cacao TCM_011660 I
TCM_015685 Theobroma cacao TCM_015685 I
TCM_021317 Theobroma cacao TCM_021317 I
TCM_021318 Theobroma cacao TCM_021318 I
TCM_037379 Theobroma cacao TCM_037379 I
TCM_037555 Theobroma cacao TCM_037555 I
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I
TRIUR3_05136 Triticum urartu TRIUR3_05136 I
TRIUR3_31689 Triticum urartu TRIUR3_31689 I
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I
Ca_03498 Cicer arietinum Ca_03498 I
Cla009418 Citrullus lanatus Cla009418 I
Cla011528 Citrullus lanatus Cla011528 I
Cla017646 Citrullus lanatus Cla017646 I
Cla022107 Citrullus lanatus Cla022107 I
Pm005571 Prunus mume Pm005571 I
Pm008294 Prunus mume Pm008294 I
Pm018338 Prunus mume Pm018338 I
Pm020104 Prunus mume Pm020104 I
Pm024189 Prunus mume Pm024189 I
Pm025102 Prunus mume Pm025102 I
28226.m000839 Ricinus communis 28226.m000839 I
30068.m002544 Ricinus communis 30068.m002544 I
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I
cassava34176.m1 Manihot esculenta cassava34176.m1 I
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I
cassava40469.m1 Manihot esculenta cassava40469.m1 I
cassava46146.m1 Manihot esculenta cassava46146.m1 I
Cucsa.069500 Cucumis sativus Cucsa.069500 I
Cucsa.252700 Cucumis sativus Cucsa.252700 I
Cucsa.304110 Cucumis sativus Cucsa.304110 I
mgf003233m Mimulus guttatus mgf003233m I
mgf006108m Mimulus guttatus mgf006108m I
mgf012733m Mimulus guttatus mgf012733m I
mgf015598m Mimulus guttatus mgf015598m I
mgf024278m Mimulus guttatus mgf024278m I
mgf025197m Mimulus guttatus mgf025197m I
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I
Carubv10012451m.g Capsella rubella Carubv10012451m.g I
Carubv10019345m.g Capsella rubella Carubv10019345m.g I
Carubv10024801m.g Capsella rubella Carubv10024801m.g I
Carubv10026694m.g Capsella rubella Carubv10026694m.g I
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I
evm.TU.supercontig_107.48 Carica papaya evm.TU.supercontig_107.48 I
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I
Gorai.008G179800 Gossypium raimondii Gorai.008G179800 I
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I
Lus10001458.g Linum usitatissimum Lus10001458.g I
Lus10002435.g Linum usitatissimum Lus10002435.g I
Lus10010273.g Linum usitatissimum Lus10010273.g I
Lus10016855.g Linum usitatissimum Lus10016855.g I
Lus10036336.g Linum usitatissimum Lus10036336.g I
Lus10036453.g Linum usitatissimum Lus10036453.g I
MDP0000119725 Malus domestica MDP0000119725 I
MDP0000157940 Malus domestica MDP0000157940 I
MDP0000607330 Malus domestica MDP0000607330 I
MDP0000915330 Malus domestica MDP0000915330 I
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I
Pavir.J00442 Panicum virgatum Pavir.J00442 I
Pavir.J00444 Panicum virgatum Pavir.J00444 I
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I
PK11717.1 Cannabis sativa PK11717.1 I
PK14784.1 Cannabis sativa PK14784.1 I
PK16958.1 Cannabis sativa PK16958.1 I
PK23594.1 Cannabis sativa PK23594.1 I
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I