ACEP23524 (Atta cephalotes)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ACEP23524 T324358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.842 0.842
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.842 0.842
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.842 0.842
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.842 0.842
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.842 0.842
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.842 0.842
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.842 0.842
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.842 0.842
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP23524-PA SMAD 30 67

Links

Other SMAD family TFs
Other Atta cephalotes TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N
NECAME_16525 Necator americanus NECAME_16525 N
NECAME_10840 Necator americanus NECAME_10840 N
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N
HCOI01420700 Haemonchus contortus HCOI01420700 N
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N
L892_g2503 Steinernema scapterisci L892_g2503 N
L889_g29516 Steinernema feltiae L889_g29516 N
L596_g8199 Steinernema carpocapsae L596_g8199 N
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N
HPBE_0000066401 Heligmosomoides bakeri HPBE_0000066401 N
HCOI02106600 Haemonchus contortus HCOI02106600 N
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N
SMUV_0000634201 Syphacia muris SMUV_0000634201 N
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N
WBGene00237022 Onchocerca volvulus WBGene00237022 N
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N
Minc04648 Meloidogyne incognita Minc04648 N
Minc03634 Meloidogyne incognita Minc03634 N
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N
mgf006762m Mimulus guttatus mgf006762m N
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N
TCM_014800 Theobroma cacao TCM_014800 N
PPA12247 Pristionchus pacificus PPA12247 N
PPA06513 Pristionchus pacificus PPA06513 N
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N
LotgiG207546 Lottia gigantea LotgiG207546 N
LOAG_14354 Loa loa LOAG_14354 N
EFV62220 Trichinella spiralis EFV62220 N
Bm6643 Brugia malayi Bm6643 N
ASU_05752 Ascaris suum ASU_05752 N
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N
WUBG_02390 Wuchereria bancrofti WUBG_02390 N
DME_0000590001 Dracunculus medinensis DME_0000590001 N
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N
BTMF_0000229601 Brugia timori BTMF_0000229601 N
ASU_07820 Ascaris suum ASU_07820 N
HCOI00417600 Haemonchus contortus HCOI00417600 N
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N