CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g15
(
Steinernema carpocapsae
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
L596_g15
T325732_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.706
0.706
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g15.t1
SMAD
71
172
SKKAIDSLIKKLKDKREELDYLIVAVASRGNSPTKCVNIPRTLDGRLQVAGRKGFPHVVYSRIFRYSDLHKNELKHIPGCETAFDLKCESVCINPYHYERVP
Links
Other
SMAD
family TFs
Other
Steinernema carpocapsae
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Med
Drosophila melanogaster
FBgn0011655
D
0.706
PPAI002168
Phlebotomus papatasi
PPAI002168
I
0.706
ANCCAN_20978
Ancylostoma caninum
ANCCAN_20978
I
0.706
MDOA012885
Musca domestica
MDOA012885
I
0.706
LLOJ008806
Lutzomyia longipalpis
LLOJ008806
I
0.706
BGLB014287
Biomphalaria glabrata
BGLB014287
I
0.706
ASTEI00079
Anopheles stephensi
ASTEI00079
I
0.716
AQUA009305
Anopheles quadriannulatus
AQUA009305
I
0.716
AMIN000723
Anopheles minimus
AMIN000723
I
0.716
AMEM015931
Anopheles merus
AMEM015931
I
0.716
AMAM019778
Anopheles maculatus
AMAM019778
I
0.716
AFUN009864
Anopheles funestus
AFUN009864
I
0.716
AFAF011208
Anopheles farauti
AFAF011208
I
0.716
AEPI002385
Anopheles epiroticus
AEPI002385
I
0.716
ADIR002761
Anopheles dirus
ADIR002761
I
0.716
ACUA025512
Anopheles culicifacies
ACUA025512
I
0.716
ACOM037505
Anopheles coluzzii
ACOM037505
I
0.716
ACHR000067
Anopheles christyi
ACHR000067
I
0.716
AATE010695
Anopheles atroparvus
AATE010695
I
0.716
AARA004719
Anopheles arabiensis
AARA004719
I
0.716
AALB009485
Anopheles albimanus
AALB009485
I
0.725
XP_002161797.1
Hydra magnipapillata
XP_002161797.1
I
0.706
CpipJ_CPIJ002563
Culex pipiens
CpipJ_CPIJ002563
I
0.716
Minc05381
Meloidogyne incognita
Minc05381
I
0.706
L893_g344
Steinernema glaseri
L893_g344
I
0.941
TTRE_0000855901
Trichuris trichiura
TTRE_0000855901
I
0.716
TMUE_s0006012700
Trichuris muris
TMUE_s0006012700
I
0.725
TELCIR_19676
Teladorsagia circumcincta
TELCIR_19676
I
0.706
SVUK_0000938201
Strongylus vulgaris
SVUK_0000938201
I
0.706
nOo.2.0.1.g00181
Onchocerca ochengi
nOo.2.0.1.g00181
I
0.745
nLs.2.1.2.g01457
Litomosoides sigmodontis
nLs.2.1.2.g01457
I
0.725
nDi.2.2.2.g01429
Dirofilaria immitis
nDi.2.2.2.g01429
I
0.735
nAv.1.0.1.g00430
Acanthocheilonema viteae
nAv.1.0.1.g00430
I
0.735
maker-nMf.1.1.scaf02670-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf02670-augustus-gene-0.3
I
0.706
L898_g17086
Steinernema monticolum
L898_g17086
I
0.912
Minc06628
Meloidogyne incognita
Minc06628
I
0.706
L892_g27454
Steinernema scapterisci
L892_g27454
I
0.853
L889_g28104
Steinernema feltiae
L889_g28104
I
0.951
HCOI00676200
Haemonchus contortus
HCOI00676200
I
0.716
GPUH_0001329001
Gongylonema pulchrum
GPUH_0001329001
I
0.735
GPLIN_000772200
Globodera pallida
GPLIN_000772200
I
0.716
EEL_0000707501
Elaeophora elaphi
EEL_0000707501
I
0.735
D917_09719
Trichinella nativa
D917_09719
I
0.706
BTMF_0000404601
Brugia timori
BTMF_0000404601
I
0.716
ASU_13433
Ascaris suum
ASU_13433
I
0.735
ASIM_0001604001
Anisakis simplex
ASIM_0001604001
I
0.735
ENSGACG00000003171
Gasterosteus aculeatus
ENSGACG00000003171
I
0.706
GB50071
Apis mellifera
GB50071
I
0.716
SMU15015494
Schmidtea mediterranea
SMU15015494
I
0.725
GK11724
Drosophila willistoni
FBgn0213735
I
0.706
GJ23092
Drosophila virilis
FBgn0210194
I
0.706
GM16436
Drosophila sechellia
FBgn0171351
I
0.706
GL23637
Drosophila persimilis
FBgn0161227
I
0.706
GI23400
Drosophila mojavensis
FBgn0146126
I
0.706
GH18642
Drosophila grimshawi
FBgn0126109
I
0.706
GG11819
Drosophila erecta
FBgn0104114
I
0.706
GF22974
Drosophila ananassae
FBgn0099968
I
0.706
GA14643
Drosophila pseudoobscura
FBgn0074670
I
0.706
GE10952
Drosophila yakuba
FBgn0228782
I
0.706
EFV62078
Trichinella spiralis
EFV62078
I
0.706
DAPPUDRAFT_304115
Daphnia pulex
DAPPUDRAFT_304115
I
0.716
CPIJ002563
Culex quinquefasciatus
CPIJ002563
I
0.716
Bm3575
Brugia malayi
Bm3575
I
0.716
BGIBMGA010110
Bombyx mori
BGIBMGA010110
I
0.716
AGAP002902
Anopheles gambiae
AGAP002902
I
0.716
ADAC007516
Anopheles darlingi
ADAC007516
I
0.725
ACYPI000365
Acyrthosiphon pisum
ACYPI000365
I
0.706
AAEL013896
Aedes aegypti
AAEL013896
I
0.706
WUBG_02880
Wuchereria bancrofti
WUBG_02880
I
0.716
SMAR013850
Strigamia maritima
SMAR013850
I
0.706
LDEC015949
Leptinotarsa decemlineata
LDEC015949
I
0.706
LCUP007928
Lucilia cuprina
LCUP007928
I
0.706
Ocbimv22032358m.g
Octopus bimaculoides
Ocbimv22032358m.g
I
0.706
Hsal_09633--XP_392838.3_APIME
Harpegnathos saltator
Hsal_09633--XP_392838.3_APIME
I
0.716
Cflo_07183--XP_392838.3_APIME
Camponotus floridanus
Cflo_07183--XP_392838.3_APIME
I
0.716
YQE_06624
Dendroctonus ponderosae
YQE_06624
I
0.716
WBGene00241622
Onchocerca volvulus
WBGene00241622
I
0.745
TriadG30731
Trichoplax adhaerens
TriadG30731
I
0.706
tetur10g00400
Tetranychus urticae
tetur10g00400
I
0.706
TC010848
Tribolium castaneum
TC010848
I
0.706
HelroG76435
Helobdella robusta
HelroG76435
I
0.735
SINV15516
Solenopsis invicta
SINV15516
I
0.716
PHUM002670
Pediculus humanus
PHUM002670
I
0.706
NV12984
Nasonia vitripennis
NV12984
I
0.716
MCINX014520
Melitaea cinxia
MCINX014520
I
0.716
LOAG_08923
Loa loa
LOAG_08923
I
0.716
L798_13939
Zootermopsis nevadensis
L798_13939
I
0.706
KGM_12572
Danaus plexippus
KGM_12572
I
0.716
ISCW018468
Ixodes scapularis
ISCW018468
I
0.706
HMEL002203
Heliconius melpomene
HMEL002203
I
0.716
HelroG88197
Helobdella robusta
HelroG88197
I
0.775
L893_g8358
Steinernema glaseri
L893_g8358
N
0.706
genemark-nMf.1.1.scaf08549-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf08549-processed-gene-0.3
N
0.725
MhA1_Contig1148.frz3.fgene1
Meloidogyne hapla
MhA1_Contig1148.frz3.fgene1
N
0.735
BXY_0211100
Bursaphelenchus xylophilus
BXY_0211100
N
0.706
Minc15475
Meloidogyne incognita
Minc15475
N
0.725