CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_346686
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_346686
T330139_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA14041
Sox
90
136
NKQKLVPISKKLSKILWEDLSSEHQNFFEELALKVNVEHKKLYPNYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sox17
Mus musculus
ENSMUSG00000025902
D
0.425
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.435
SOX8
Equus caballus
ENSECAG00000016320
I
0.437
SOX2
Felis catus
ENSFCAG00000029205
I
0.516
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.440
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.537
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.440
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.420
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.449
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.516
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.425
SOX17
Sorex araneus
ENSSARG00000009573
I
0.425
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.455
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.435
HMEL002398
Heliconius melpomene
HMEL002398
I
0.454
MESCA012239
Megaselia scalaris
MESCA012239
I
0.534
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.534
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.440
ENSP00000322568
Macaca fascicularis
ENSP00000322568
I
0.421
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.461
ACOM029353
Anopheles coluzzii
ACOM029353
I
0.427
AMEC000538
Anopheles melas
AMEC000538
I
0.461
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.433
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.425
AAEL000771
Aedes aegypti
AAEL000771
N
0.432
ACEP10857
Atta cephalotes
ACEP10857
N
0.433
ACEP25851
Atta cephalotes
ACEP25851
N
0.425
AGAP028091
Anopheles gambiae
AGAP028091
N
0.425
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
0.433
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.422
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.433
BOTBODRAFT_575781
Botryobasidium botryosum
BOTBODRAFT_575781
N
0.455
CaO19.1731
Candida albicans
CaO19.1731
N
0.422
CaO19.9299
Candida albicans
CaO19.9299
N
0.422
CC1G_05598
Coprinopsis cinerea
CC1G_05598
N
0.423
CC1G_07924
Coprinopsis cinerea
CC1G_07924
N
0.424
CFIO01_04514
Colletotrichum fioriniae
CFIO01_04514
N
0.419
CNM02020
Cryptococcus neoformans
CNM02020
N
0.573
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.433
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.425
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
0.440
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.432
SOX18
Callithrix jacchus
ENSCJAG00000022379
N
0.425
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.425
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.432
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.510
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.432
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.432
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.430
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.481
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.721
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
0.451
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.645
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.530
GYMLUDRAFT_143012
Gymnopus luxurians
GYMLUDRAFT_143012
N
0.457
GYMLUDRAFT_48652
Gymnopus luxurians
GYMLUDRAFT_48652
N
0.467
H072_9933
Dactylellina haptotyla
H072_9933
N
0.440
HYDPIDRAFT_51400
Hydnomerulius pinastri
HYDPIDRAFT_51400
N
0.417
JAAARDRAFT_697179
Jaapia argillacea
JAAARDRAFT_697179
N
0.422
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.523
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.441
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.437
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.433
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.523
LACBIDRAFT_333050
Laccaria bicolor
LACBIDRAFT_333050
N
0.446
MESCA006364
Megaselia scalaris
MESCA006364
N
0.467
PDIP_33190
Penicillium digitatum
PDIP_33190
N
0.442
PEX1_064750
Penicillium expansum
PEX1_064750
N
0.442
PFICI_02946
Pestalotiopsis fici
PFICI_02946
N
0.493
PHUM433280
Pediculus humanus
PHUM433280
N
0.425
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.523
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
0.490
POSPLDRAFT_103238
Postia placenta
POSPLDRAFT_103238
N
0.515
POSPLDRAFT_104634
Postia placenta
POSPLDRAFT_104634
N
0.428
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
0.504
PTTG_00444
Puccinia triticina
PTTG_00444
N
0.471
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.467
RPRC013413
Rhodnius prolixus
RPRC013413
N
0.440
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.530
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
0.436
SINV16572
Solenopsis invicta
SINV16572
N
0.425
SINV19749
Solenopsis invicta
SINV19749
N
0.433
SMAR010125
Strigamia maritima
SMAR010125
N
0.432
TC009856
Tribolium castaneum
TC009856
N
0.425
Thaps7519
Thalassiosira pseudonana
Thaps7519
N
0.423
UCREL1_237
Eutypa lata
UCREL1_237
N
0.463
UCREL1_469
Eutypa lata
UCREL1_469
N
0.510
UCREL1_749
Eutypa lata
UCREL1_749
N
0.517
WALSEDRAFT_27096
Wallemia sebi
WALSEDRAFT_27096
N
0.430
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.522
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.516
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.425
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.517
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.544
Ca_14341
Cicer arietinum
Ca_14341
N
0.433
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.498
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.534
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.432
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.430
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
0.507
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.525
CLEC006960
Cimex lectularius
CLEC006960
N
0.433
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.425
LCUP001586
Lucilia cuprina
LCUP001586
N
0.452
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.433
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.489
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.420
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.420
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.493
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.527
XP_002935940
Xenopus tropicalis
XP_002935940
N
0.418
AALB009772
Anopheles albimanus
AALB009772
N
0.432
AALB009867
Anopheles albimanus
AALB009867
N
0.440
AARA000825
Anopheles arabiensis
AARA000825
N
0.425
AATE015714
Anopheles atroparvus
AATE015714
N
0.425
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.433
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.432
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.433
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.432
ADIR005631
Anopheles dirus
ADIR005631
N
0.433
ADIR009661
Anopheles dirus
ADIR009661
N
0.425
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.433
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.432
AFUN009317
Anopheles funestus
AFUN009317
N
0.425
AFUN010198
Anopheles funestus
AFUN010198
N
0.433
AMAM023617
Anopheles maculatus
AMAM023617
N
0.425
AMEC011653
Anopheles melas
AMEC011653
N
0.432
AMEM002834
Anopheles merus
AMEM002834
N
0.432
AMEM007694
Anopheles merus
AMEM007694
N
0.509
AMIN009302
Anopheles minimus
AMIN009302
N
0.433
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.433
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.432
ASIS001889
Anopheles sinensis
ASIS001889
N
0.432
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.432
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.433
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.462
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.493
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.444
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.433
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.435
D918_08317
Trichuris suis
D918_08317
N
0.426
DICVIV_04576
Dictyocaulus viviparus
DICVIV_04576
N
0.425
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.526
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.450
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.534
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.456
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.493
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.482
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.482
TMUE_s0015010800
Trichuris muris
TMUE_s0015010800
N
0.427
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.449
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.463