Ca_11295 (Cicer arietinum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Ca_11295 T344511_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.935 0.405
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.935 0.405
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.930 0.367
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.930 0.367
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.930 0.367
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.917 0.386
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.316
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.896 0.348
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.890 0.348
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.836 0.278
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.833 0.297
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.833 0.259
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_11295 TCP 22 308

Links

Other TCP family TFs
Other Cicer arietinum TFs

388 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
L893_g9517 Steinernema glaseri L893_g9517 I 0.000
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.000
L889_g10781 Steinernema feltiae L889_g10781 I 0.000
L889_g17146 Steinernema feltiae L889_g17146 I 0.000
L889_g9698 Steinernema feltiae L889_g9698 I 0.000
L889_g987 Steinernema feltiae L889_g987 I 0.000
L892_g10708 Steinernema scapterisci L892_g10708 I 0.000
L892_g8140 Steinernema scapterisci L892_g8140 I 0.000
L892_g8144 Steinernema scapterisci L892_g8144 I 0.000
L892_g8145 Steinernema scapterisci L892_g8145 I 0.000
L893_g2090 Steinernema glaseri L893_g2090 I 0.000
L893_g4569 Steinernema glaseri L893_g4569 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
L898_g10723 Steinernema monticolum L898_g10723 I 0.000
L898_g18539 Steinernema monticolum L898_g18539 I 0.000
L898_g28806 Steinernema monticolum L898_g28806 I 0.000
L898_g9580 Steinernema monticolum L898_g9580 I 0.000
NECAME_01500 Necator americanus NECAME_01500 I 0.000
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.000
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.000
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.000
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.000
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.000
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CJA04414 Caenorhabditis japonica CJA04414 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CJA10576 Caenorhabditis japonica CJA10576 I 0.000
CRE17354 Caenorhabditis remanei CRE17354 I 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE27659 Caenorhabditis remanei CRE27659 I 0.000
PPA08785 Pristionchus pacificus PPA08785 I 0.000
PPA10478 Pristionchus pacificus PPA10478 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
CBG16375 Caenorhabditis briggsae CBG16375 I 0.000
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.000
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.000
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.000
CBG03687 Caenorhabditis briggsae CBG03687 I 0.000
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.000
SSTP_0000309200 Strongyloides stercoralis SSTP_0000309200 N 0.000
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.000
L893_g3450 Steinernema glaseri L893_g3450 N 0.000
L892_g8146 Steinernema scapterisci L892_g8146 N 0.000
ASU_03038 Ascaris suum ASU_03038 N 0.000
L889_g16048 Steinernema feltiae L889_g16048 N 0.000
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.000
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.000