GLYMA13G38030 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA13G38030 T001950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.724 0.939
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G38030.1 AP2 63 114

Links

Other AP2 family TFs
Other Glycine max TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002292 Ricinus communis 29729.m002292 I 0.693
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.752
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.691
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.712
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.684
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.704
Ca_14133 Cicer arietinum Ca_14133 I 0.777
Ca_22585 Cicer arietinum Ca_22585 I 0.792
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.685
Cla001755 Citrullus lanatus Cla001755 I 0.695
Cla006713 Citrullus lanatus Cla006713 I 0.708
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.695
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.709
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.687
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.706
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.684
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.719
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.745
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.722
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.822
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.686
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.703
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.687
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.693
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.702
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.683
MDP0000147009 Malus domestica MDP0000147009 I 0.717
MDP0000165880 Malus domestica MDP0000165880 I 0.718
MDP0000290585 Malus domestica MDP0000290585 I 0.683
MDP0000446783 Malus domestica MDP0000446783 I 0.717
MTR_0939s0010 Medicago truncatula MTR_0939s0010 I 0.776
MTR_2g089170 Medicago truncatula MTR_2g089170 N 0.758
OBART05G12580 Oryza barthii OBART05G12580 I 0.686
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.684
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.684
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.684
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.684
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.684
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.685
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.686
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.684
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.680
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.680
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.685
PK07402.1 Cannabis sativa PK07402.1 D 0.724
Pm015262 Prunus mume Pm015262 I 0.687
Pm018989 Prunus mume Pm018989 I 0.715
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.696
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.702
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.715
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.687
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.687
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.698
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.687
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.698
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.680
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.679
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.705