ONIVA10G21000 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA10G21000 T003670_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.798 0.940
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.754 0.880
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.754 0.880
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.754 0.880
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.754 0.900
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.754 0.900
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.746 0.880
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.746 0.880
AT3G16280
M06618_2.00 		Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
AT3G16280_col_a 		0.713 0.880
AT3G16280
M06619_2.00 		Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV		 Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a 		0.713 0.880
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.705 0.880
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.705 0.880
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.705 0.880
ERF039
M01620_2.00 		Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH8101 		0.696 0.880
ERF039
M06635_2.00 		Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND		 Dap-seq
OMalley et al.(2016)
At4g16750_col_a 		0.696 0.880
ERF039
M06636_2.00 		Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a 		0.696 0.880
ERF038
M06608_2.00 		Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF38_col_a 		0.696 0.860
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.690 0.860
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.690 0.860
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.690 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G21000.1 AP2 94 145

Links

Other AP2 family TFs
Other Oryza nivara TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004749 Ricinus communis 29929.m004749 I
30190.m011004 Ricinus communis 30190.m011004 I
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I
AtMYB40 Arabidopsis thaliana AT5G14340 D
AtMYB40 Populus trichocarpa POPTR_0008s18110 I
AtMYB40 Vitis vinifera VIT_14s0219g00050 I
BGIOSGA026529 Oryza indica BGIOSGA026529 I
BGIOSGA029380 Oryza indica BGIOSGA029380 I
Bo2g013190 Brassica oleracea Bo2g013190 I
Bo3g009730 Brassica oleracea Bo3g009730 I
Bo3g165540 Brassica oleracea Bo3g165540 I
Bo4g101470 Brassica oleracea Bo4g101470 I
Bo6g099800 Brassica oleracea Bo6g099800 I
Bo9g163020 Brassica oleracea Bo9g163020 I
Bo9g166000 Brassica oleracea Bo9g166000 I
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I
Bra004155 Brassica rapa Bra004155 I
Bra006249 Brassica rapa Bra006249 I
Bra008764 Brassica rapa Bra008764 I
BRADI3G42430 Brachypodium distachyon BRADI3G42430 I
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I
Carubv10001378m.g Capsella rubella Carubv10001378m.g I
Carubv10003172m.g Capsella rubella Carubv10003172m.g I
Carubv10020766m.g Capsella rubella Carubv10020766m.g I
cassava15064.m1 Manihot esculenta cassava15064.m1 I
cassava17364.m1 Manihot esculenta cassava17364.m1 I
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I
cassava21367.m1 Manihot esculenta cassava21367.m1 I
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I
cassava33331.m1 Manihot esculenta cassava33331.m1 I
cassava3745.m1 Manihot esculenta cassava3745.m1 I
cassava47045.m1 Manihot esculenta cassava47045.m1 I
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I
Ca_08722 Cicer arietinum Ca_08722 I
Ca_13286 Cicer arietinum Ca_13286 I
Ca_19393 Cicer arietinum Ca_19393 I
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I
Cla003626 Citrullus lanatus Cla003626 I
Cla004104 Citrullus lanatus Cla004104 I
Cla011736 Citrullus lanatus Cla011736 I
Cucsa.006170 Cucumis sativus Cucsa.006170 I
Cucsa.156340 Cucumis sativus Cucsa.156340 I
Cucsa.302180 Cucumis sativus Cucsa.302180 I
Cucsa.375180 Cucumis sativus Cucsa.375180 I
estExt_gwp_gw1.C_780109 Physcomitrella patens estExt_gwp_gw1.C_780109 N
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I
F775_19511 Aegilops tauschii F775_19511 I
fgenesh1_pg.scaffold_420000003 Physcomitrella patens fgenesh1_pg.scaffold_420000003 I
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I
GLYMA01G42050 Glycine max GLYMA01G42050 I
GLYMA02G41180 Glycine max GLYMA02G41180 I
GLYMA05G03780 Glycine max GLYMA05G03780 I
GLYMA05G06410 Glycine max GLYMA05G06410 I
GLYMA11G03300 Glycine max GLYMA11G03300 I
GLYMA11G33620 Glycine max GLYMA11G33620 I
GLYMA14G39530 Glycine max GLYMA14G39530 I
GLYMA16G06900 Glycine max GLYMA16G06900 I
GLYMA17G14291 Glycine max GLYMA17G14291 I
GLYMA18G04580 Glycine max GLYMA18G04580 I
GLYMA19G07830 Glycine max GLYMA19G07830 I
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I
Gorai.006G195700 Gossypium raimondii Gorai.006G195700 I
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I
GRMZM2G037650 Zea mays GRMZM2G037650 I
GRMZM2G104551 Zea mays GRMZM2G104551 I
GRMZM2G106558 Zea mays GRMZM2G106558 I
GRMZM2G138427 Zea mays GRMZM2G138427 I
GSMUA_Achr1G18610_001 Musa acuminata GSMUA_Achr1G18610_001 I
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N
Lus10004042.g Linum usitatissimum Lus10004042.g I
Lus10014569.g Linum usitatissimum Lus10014569.g I
Lus10024589.g Linum usitatissimum Lus10024589.g I
Lus10027197.g Linum usitatissimum Lus10027197.g I
Lus10032117.g Linum usitatissimum Lus10032117.g I
Lus10032226.g Linum usitatissimum Lus10032226.g I
Lus10038913.g Linum usitatissimum Lus10038913.g I
MDP0000241111 Malus domestica MDP0000241111 I
MDP0000303239 Malus domestica MDP0000303239 I
MDP0000602739 Malus domestica MDP0000602739 I
MDP0000682032 Malus domestica MDP0000682032 I
MDP0000787808 Malus domestica MDP0000787808 I
mgf017719m Mimulus guttatus mgf017719m I
mgf018940m Mimulus guttatus mgf018940m I
mgf025004m Mimulus guttatus mgf025004m I
MTR_3g065440 Medicago truncatula MTR_3g065440 I
MTR_4g102380 Medicago truncatula MTR_4g102380 I
MTR_5g078140 Medicago truncatula MTR_5g078140 I
MYB20 Arabidopsis thaliana AT1G66230 I
MYB20 Arabidopsis lyrata scaffold_201335.1 I
MYB43 Arabidopsis thaliana AT5G16600 D
MYB43 Arabidopsis lyrata scaffold_601700.1 I
MYB43 Vitis vinifera VIT_14s0006g00450 I
OB08G29480 Oryza brachyantha OB08G29480 I
OB09G24070 Oryza brachyantha OB09G24070 I
OLONG_005336 Oryza longistaminata OLONG_005336 I
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I
ORGLA08G0217800 Oryza glaberrima ORGLA08G0217800 I
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I
ORUFI08G25210 Oryza rufipogon ORUFI08G25210 I
OS09G0532900 Oryza sativa OS09G0532900 I
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I
Pavir.Ba02150 Panicum virgatum Pavir.Ba02150 I
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I
Pavir.Fa00850 Panicum virgatum Pavir.Fa00850 I
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I
Pavir.Fb02321 Panicum virgatum Pavir.Fb02321 I
Pavir.J21364 Panicum virgatum Pavir.J21364 I
Pavir.J36915 Panicum virgatum Pavir.J36915 I
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I
PK08857.1 Cannabis sativa PK08857.1 I
PK21166.1 Cannabis sativa PK21166.1 D
Pm013020 Prunus mume Pm013020 I
Pm015564 Prunus mume Pm015564 I
Pm019472 Prunus mume Pm019472 I
Pm023573 Prunus mume Pm023573 I
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I
Sb02g030900 Sorghum bicolor Sb02g030900 I
Si030711m.g Setaria italica Si030711m.g I
Si030750m.g Setaria italica Si030750m.g I
Si031939m.g Setaria italica Si031939m.g I
Si032544m.g Setaria italica Si032544m.g I
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I
TCM_014956 Theobroma cacao TCM_014956 I
TCM_016054 Theobroma cacao TCM_016054 I
TCM_017051 Theobroma cacao TCM_017051 I
TCM_019116 Theobroma cacao TCM_019116 I
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I