CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g028004m.g
(
Citrus sinensis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
orange1.1g028004m.g
T009236_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g028004m
AP2
53
103
PSYRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGP
Links
Other
AP2
family TFs
Other
Citrus sinensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.732
cassava35063.m1
Manihot esculenta
cassava35063.m1
N
0.698
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.732
Cla006314
Citrullus lanatus
Cla006314
N
0.703
Eucgr.D01924
Eucalyptus grandis
Eucgr.D01924
I
0.704
fgenesh1_pm.C_scaffold_1001063
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001063
I
0.678
Gorai.006G197200
Gossypium raimondii
Gorai.006G197200
N
0.718
Gorai.007G010200
Gossypium raimondii
Gorai.007G010200
N
0.700
mgf025854m
Mimulus guttatus
mgf025854m
I
0.686
OPUNC04G19950
Oryza punctata
OPUNC04G19950
N
0.694
POPTR_0003s12120
Populus trichocarpa
POPTR_0003s12120
N
0.680
SapurV1A.0068s0570
Salix purpurea
SapurV1A.0068s0570
N
0.684
SapurV1A.0400s0170
Salix purpurea
SapurV1A.0400s0170
N
0.681
scaffold_101390.1
Arabidopsis lyrata
scaffold_101390.1
I
0.678
TCM_015083
Theobroma cacao
TCM_015083
N
0.711
VIT_02s0025g04440
Vitis vinifera
VIT_02s0025g04440
N
0.706