orange1.1g043551m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g043551m.g T009292_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g043551m AP2 71 128
orange1.1g043551m AP2 166 215

Links

Other AP2 family TFs
Other Citrus sinensis TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003477 Ricinus communis 29822.m003477 N 0.832
30069.m000440 Ricinus communis 30069.m000440 N 0.763
30114.m000507 Ricinus communis 30114.m000507 N 0.743
ADAP Arabidopsis thaliana AT1G16060 I 0.765
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.771
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.747
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.751
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.836
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.758
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.735
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.743
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.789
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.753
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.705
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.759
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.755
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.750
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.744
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.744
Bo5g021520 Brassica oleracea Bo5g021520 N 0.771
Bo6g067950 Brassica oleracea Bo6g067950 I 0.739
Bo6g124080 Brassica oleracea Bo6g124080 N 0.765
Bo8g083590 Brassica oleracea Bo8g083590 I 0.738
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.738
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.760
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.771
Bra003178 Brassica rapa Bra003178 N 0.764
Bra007066 Brassica rapa Bra007066 N 0.763
Bra026082 Brassica rapa Bra026082 I 0.765
Bra035137 Brassica rapa Bra035137 I 0.762
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.750
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.763
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.754
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.754
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.697
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.738
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.745
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.728
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.762
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.738
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.757
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.823
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.769
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.790
Ca_03306 Cicer arietinum Ca_03306 N 0.742
Ca_10533 Cicer arietinum Ca_10533 N 0.829
Ca_17532 Cicer arietinum Ca_17532 N 0.772
Ca_20689 Cicer arietinum Ca_20689 N 0.817
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.821
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.827
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.749
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.760
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.749
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.771
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.739
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.892
Cla015555 Citrullus lanatus Cla015555 N 0.749
Cla017294 Citrullus lanatus Cla017294 N 0.737
Cla019044 Citrullus lanatus Cla019044 N 0.752
Cla020765 Citrullus lanatus Cla020765 N 0.751
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.746
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.746
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.723
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.759
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.748
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.744
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.752
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.701
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.771
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.807
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.809
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.743
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.769
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.696
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.751
F775_02064 Aegilops tauschii F775_02064 N 0.701
F775_02400 Aegilops tauschii F775_02400 I 0.750
F775_06373 Aegilops tauschii F775_06373 N 0.717
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.759
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.770
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.787
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.751
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.749
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.737
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.749
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.749
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.747
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.772
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.788
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.756
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.784
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.785
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.737
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.760
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.782
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.810
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.799
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.857
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.760
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.798
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.735
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.789
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.743
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.729
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.759
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.739
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.782
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.752
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.757
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.734
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.754
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.753
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.703
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.739
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.779
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.758
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.735
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.749
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.775
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.741
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.791
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.745
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.737
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.775
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.797
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.787
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.787
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.744
MDP0000133423 Malus domestica MDP0000133423 N 0.749
MDP0000186581 Malus domestica MDP0000186581 N 0.798
MDP0000206674 Malus domestica MDP0000206674 N 0.773
MDP0000231748 Malus domestica MDP0000231748 N 0.751
MDP0000281784 Malus domestica MDP0000281784 I 0.805
MDP0000297698 Malus domestica MDP0000297698 N 0.798
MDP0000318457 Malus domestica MDP0000318457 N 0.749
mg013664m Mimulus guttatus mg013664m N 0.801
mgf008907m Mimulus guttatus mgf008907m I 0.727
mgf017413m Mimulus guttatus mgf017413m N 0.722
mgf019116m Mimulus guttatus mgf019116m N 0.716
mgf019814m Mimulus guttatus mgf019814m N 0.802
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.749
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.773
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.736
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.827
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.841
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.781
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.765
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.842
OB05G31600 Oryza brachyantha OB05G31600 I 0.712
OB09G17420 Oryza brachyantha OB09G17420 I 0.750
OB11G11380 Oryza brachyantha OB11G11380 I 0.700
OB12G11690 Oryza brachyantha OB12G11690 I 0.700
OBART06G03040 Oryza barthii OBART06G03040 N 0.759
OBART09G10730 Oryza barthii OBART09G10730 N 0.753
OBART12G01740 Oryza barthii OBART12G01740 N 0.732
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.779
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.753
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.757
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.705
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.739
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.743
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.779
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.753
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.744
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.744
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.744
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.759
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.779
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.750
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.744
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.705
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.776
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.740
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.744
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.744
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.739
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.760
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.771
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.759
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.755
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.750
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.700
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.744
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.759
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.779
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.753
OS05G0536250 Oryza sativa OS05G0536250 I 0.705
OS06G0145700 Oryza sativa OS06G0145700 N 0.738
OS08G0442400 Oryza sativa OS08G0442400 I 0.755
OS09G0423800 Oryza sativa OS09G0423800 I 0.750
OS12G0126300 Oryza sativa OS12G0126300 I 0.700
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.750
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.739
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.759
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.739
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.762
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.786
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.719
PK04008.1 Cannabis sativa PK04008.1 I 0.735
PK24809.1 Cannabis sativa PK24809.1 I 0.792
PK26651.1 Cannabis sativa PK26651.1 I 0.737
Pm006561 Prunus mume Pm006561 N 0.871
Pm008629 Prunus mume Pm008629 I 0.743
Pm013856 Prunus mume Pm013856 N 0.752
Pm015843 Prunus mume Pm015843 N 0.811
Pm015847 Prunus mume Pm015847 N 0.841
Pm017032 Prunus mume Pm017032 N 0.763
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.743
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.711
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.718
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.861
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.713
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.832
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.749
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.752
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.871
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.841
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.743
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.832
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.697
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.695
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.743
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.743
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.743
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.750
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.683
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.761
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.759
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.739
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.759
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.761
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.745
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.772
Si007857m.g Setaria italica Si007857m.g N 0.762
Si012026m.g Setaria italica Si012026m.g N 0.781
Si013842m.g Setaria italica Si013842m.g N 0.754
Si022186m.g Setaria italica Si022186m.g I 0.739
Si026433m.g Setaria italica Si026433m.g N 0.781
Si030129m.g Setaria italica Si030129m.g I 0.749
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.692
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.744
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.784
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.730
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.743
TCM_011797 Theobroma cacao TCM_011797 N 0.867
TCM_018386 Theobroma cacao TCM_018386 N 0.765
TCM_027569 Theobroma cacao TCM_027569 I 0.745
TCM_038442 Theobroma cacao TCM_038442 N 0.749
TCM_044588 Theobroma cacao TCM_044588 I 0.735
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.764
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.763
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.718
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.708
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.738
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.701
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.756
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.701
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.762
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.750
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.728
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.825
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.743
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.774
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.829
WRI1 Arabidopsis thaliana AT3G54320 I 0.738
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.763
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.734