Q8S2T3_BRANA (Brassica napus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Q8S2T3_BRANA T010128_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8S2T3_BRANA
M09745_2.00		 Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.811 1.000
Q8W242_BRANA
M09747_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF_01 		0.707 0.900
Q8S2T2_BRANA
M09744_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF17_01 		0.707 0.900
A6N8P3_BRANA
M09738_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBI5_01 		0.707 0.900
Q8S2T5_BRANA
M09746_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF5_01 		0.705 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.703 0.860
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.703 0.860
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.703 0.860
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.699 0.880
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.699 0.880
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.696 0.860
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.696 0.860
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.696 0.860
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.696 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q8S2T3_BRANA AP2 49 100

Links

Other AP2 family TFs
Other Brassica napus TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000771 Aedes aegypti AAEL000771 N
AALB009772 Anopheles albimanus AALB009772 N
AALB009867 Anopheles albimanus AALB009867 N
AARA000825 Anopheles arabiensis AARA000825 N
AATE015714 Anopheles atroparvus AATE015714 N
AATE016483 Anopheles atroparvus AATE016483 N
ACEP10857 Atta cephalotes ACEP10857 N
ACEP25851 Atta cephalotes ACEP25851 N
ACHR008996 Anopheles christyi ACHR008996 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACOM026653 Anopheles coluzzii ACOM026653 N
ACUA008827 Anopheles culicifacies ACUA008827 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ACUA012732 Anopheles culicifacies ACUA012732 N
ADIR005631 Anopheles dirus ADIR005631 N
ADIR009661 Anopheles dirus ADIR009661 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AEPI007652 Anopheles epiroticus AEPI007652 N
AEPI007948 Anopheles epiroticus AEPI007948 N
Afo_R012388 Aptenodytes forsteri Afo_R012388 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
AFUN006689 Anopheles funestus AFUN006689 N
AFUN009317 Anopheles funestus AFUN009317 N
AFUN010198 Anopheles funestus AFUN010198 N
AGAP028091 Anopheles gambiae AGAP028091 N
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
AMAM004028 Anopheles maculatus AMAM004028 N
AMAM023617 Anopheles maculatus AMAM023617 N
AMEC007393 Anopheles melas AMEC007393 N
AMEC011653 Anopheles melas AMEC011653 N
AMEM002834 Anopheles merus AMEM002834 N
AMEM007694 Anopheles merus AMEM007694 N
AMIN001220 Anopheles minimus AMIN001220 N
AMIN009302 Anopheles minimus AMIN009302 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
AQUA005880 Anopheles quadriannulatus AQUA005880 N
ASIS001889 Anopheles sinensis ASIS001889 N
ASTEI06131 Anopheles stephensi ASTEI06131 N
ASTEI06408 Anopheles stephensi ASTEI06408 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
BGLB010902 Biomphalaria glabrata BGLB010902 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
CLEC006960 Cimex lectularius CLEC006960 N
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
CPIJ012498 Culex quinquefasciatus CPIJ012498 N
CPIJ014017 Culex quinquefasciatus CPIJ014017 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N
D918_08317 Trichuris suis D918_08317 N
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
ENSP00000409273 Macaca fascicularis ENSP00000409273 I
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
estExt_fgenesh2_pg.C_390049 Monosiga brevicollis estExt_fgenesh2_pg.C_390049 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
GB40963 Apis mellifera GB40963 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HHAL000218-PA Halyomorpha halys HHAL000218-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
HMEL013676 Heliconius melpomene HMEL013676 N
ISCW001638 Ixodes scapularis ISCW001638 N
L798_12046 Zootermopsis nevadensis L798_12046 N
L898_g4879 Steinernema monticolum L898_g4879 N
LCUP001586 Lucilia cuprina LCUP001586 N
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC018263 Leptinotarsa decemlineata LDEC018263 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LotgiG143673 Lottia gigantea LotgiG143673 N
MESCA012239 Megaselia scalaris MESCA012239 I
Ogr00751 Ophisaurus gracilis Ogr00751 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
Ogr11176 Ophisaurus gracilis Ogr11176 N
orange1.1g014153m.g Citrus sinensis orange1.1g014153m.g N
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N
PHUM433280 Pediculus humanus PHUM433280 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
PPAI005428 Phlebotomus papatasi PPAI005428 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
RPRC001038 Rhodnius prolixus RPRC001038 N
SINV16572 Solenopsis invicta SINV16572 N
SINV19749 Solenopsis invicta SINV19749 N
SINV24165 Solenopsis invicta SINV24165 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMAR007058 Strigamia maritima SMAR007058 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
sox-2 Caenorhabditis elegans WBGene00004949 I
SOX10 Echinops telfairi ENSETEG00000012633 I
Sox17 Mus musculus ENSMUSG00000025902 D
SOX17 Sorex araneus ENSSARG00000009573 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N
SOX18 Procavia capensis ENSPCAG00000015663 N
SOX18 Pan troglodytes ENSPTRG00000030459 I
SOX2 Felis catus ENSFCAG00000029205 I
SOX2 Procavia capensis ENSPCAG00000003690 I
SOX8 Callithrix jacchus ENSCJAG00000002684 I
SOX8 Echinops telfairi ENSETEG00000015470 N
SOX8 Felis catus ENSFCAG00000004219 N
SOX8 Microcebus murinus ENSMICG00000011516 I
SOX9 Echinops telfairi ENSETEG00000020237 I
SOX9 Myotis lucifugus ENSMLUG00000030312 I
SOX9 Tupaia belangeri ENSTBEG00000000175 N
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
TC009856 Tribolium castaneum TC009856 N
TTAC_0000824601 Hydatigera taeniaeformis TTAC_0000824601 N
UCREL1_749 Eutypa lata UCREL1_749 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
YQE_03817 Dendroctonus ponderosae YQE_03817 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
YQE_13041 Dendroctonus ponderosae YQE_13041 N