CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm018120
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm018120
T022089_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm018120
B3
238
342
KSLFEADIKSGQGRLLLPREQTTSKNPKKFLKRKEKARLDKYKMQVSLIDPVLQQEDITLAWWKLSKKPKKRSFVLTHTWNHIVNKHHLDIDDLVQVWRGDHVFK
Links
Other
B3
family TFs
Other
Prunus mume
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29728.m000844
Ricinus communis
29728.m000844
N
cassava25355.m1
Manihot esculenta
cassava25355.m1
N
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
Ca_04298
Cicer arietinum
Ca_04298
N
chr5.LjT08L18.130.nd
Lotus japonicus
chr5.LjT08L18.130.nd
N
Ciclev10003213m.g
Citrus clementina
Ciclev10003213m.g
N
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
gene27489-v1.0-hybrid
Fragaria vesca
gene27489-v1.0-hybrid
N
GLYMA02G08241
Glycine max
GLYMA02G08241
N
GLYMA10G35920
Glycine max
GLYMA10G35920
N
GLYMA16G27310
Glycine max
GLYMA16G27310
N
GLYMA20G31680
Glycine max
GLYMA20G31680
N
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
Lus10014822.g
Linum usitatissimum
Lus10014822.g
N
MDP0000162468
Malus domestica
MDP0000162468
N
MDP0000169115
Malus domestica
MDP0000169115
N
MDP0000512470
Malus domestica
MDP0000512470
N
MTR_1g096030
Medicago truncatula
MTR_1g096030
N
orange1.1g041748m.g
Citrus sinensis
orange1.1g041748m.g
N
Pm022208
Prunus mume
Pm022208
N
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
TCM_036707
Theobroma cacao
TCM_036707
N
VIT_18s0076g00200
Vitis vinifera
VIT_18s0076g00200
N