POPTR_0019s00700 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0019s00700 T027391_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s00700.1 BED ZF 14 61

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_02593 Trichosporon asahii A1Q1_02593 N
AALB009239 Anopheles albimanus AALB009239 I
Aan_R003589 Calypte anna Aan_R003589 I
Aan_R004242 Calypte anna Aan_R004242 I
Aan_R004620 Calypte anna Aan_R004620 I
ACAC_0001060701 Angiostrongylus cantonensis ACAC_0001060701 I
ACHR007261 Anopheles christyi ACHR007261 I
Afo_R006770 Aptenodytes forsteri Afo_R006770 I
Alligator_sinensis_CCG014617.1 Alligator sinensis Alligator_sinensis_CCG014617.1 I
AMIN011531 Anopheles minimus AMIN011531 I
AQUA003449 Anopheles quadriannulatus AQUA003449 I
ASTEI08463 Anopheles stephensi ASTEI08463 I
BGIBMGA006156 Bombyx mori BGIBMGA006156 N
Brh_R009157 Buceros rhinoceros Brh_R009157 I
CC1G_07855 Coprinopsis cinerea CC1G_07855 N
CGI_10013448 Crassostrea gigas CGI_10013448 I
CLEC001889 Cimex lectularius CLEC001889 I
D915_02853 Fasciola hepatica D915_02853 I
D915_10792 Fasciola hepatica D915_10792 I
D917_06465 Trichinella nativa D917_06465 I
DICVIV_06227 Dictyocaulus viviparus DICVIV_06227 I
ENSACAG00000011164 Anolis carolinensis ENSACAG00000011164 I
ENSAMEG00000001543 Ailuropoda melanoleuca ENSAMEG00000001543 I
ENSAMEG00000014086 Ailuropoda melanoleuca ENSAMEG00000014086 I
ENSAMEG00000015911 Ailuropoda melanoleuca ENSAMEG00000015911 I
ENSAMXG00000005617 Astyanax mexicanus ENSAMXG00000005617 I
ENSAMXG00000011665 Astyanax mexicanus ENSAMXG00000011665 I
ENSBTAP00000014023-D1 Bos grunniens ENSBTAP00000014023-D1 I
ENSCAFG00000003434 Canis familiaris ENSCAFG00000003434 I
ENSCSAG00000004808 Chlorocebus sabaeus ENSCSAG00000004808 I
ENSCSAG00000015202 Chlorocebus sabaeus ENSCSAG00000015202 I
ENSECAG00000023955 Equus caballus ENSECAG00000023955 I
ENSFCAG00000030384 Felis catus ENSFCAG00000030384 I
ENSGALG00000006438 Gallus gallus ENSGALG00000006438 I
ENSGALG00000011349 Gallus gallus ENSGALG00000011349 I
ENSGGOG00000005374 Gorilla gorilla ENSGGOG00000005374 I
ENSGMOG00000000185 Gadus morhua ENSGMOG00000000185 I
ENSGMOG00000000385 Gadus morhua ENSGMOG00000000385 I
ENSGMOG00000005155 Gadus morhua ENSGMOG00000005155 I
ENSGMOG00000006323 Gadus morhua ENSGMOG00000006323 I
ENSLACG00000012062 Latimeria chalumnae ENSLACG00000012062 I
ENSLACG00000012409 Latimeria chalumnae ENSLACG00000012409 I
ENSLACG00000015145 Latimeria chalumnae ENSLACG00000015145 I
ENSLAFG00000027756 Loxodonta africana ENSLAFG00000027756 I
ENSLOCG00000001602 Lepisosteus oculatus ENSLOCG00000001602 I
ENSLOCG00000009641 Lepisosteus oculatus ENSLOCG00000009641 I
ENSLOCG00000010942 Lepisosteus oculatus ENSLOCG00000010942 I
ENSLOCG00000012445 Lepisosteus oculatus ENSLOCG00000012445 I
ENSMEUG00000005625 Macropus eugenii ENSMEUG00000005625 I
ENSMGAG00000005066 Meleagris gallopavo ENSMGAG00000005066 I
ENSMMUG00000016980 Macaca mulatta ENSMMUG00000016980 I
ENSMPUG00000003374 Mustela putorius furo ENSMPUG00000003374 I
ENSMPUG00000006459 Mustela putorius furo ENSMPUG00000006459 I
ENSMPUG00000007308 Mustela putorius furo ENSMPUG00000007308 I
ENSMPUG00000009771 Mustela putorius furo ENSMPUG00000009771 I
ENSNLEG00000010227 Nomascus leucogenys ENSNLEG00000010227 I
ENSNLEG00000016560 Nomascus leucogenys ENSNLEG00000016560 I
ENSOANG00000006138 Ornithorhynchus anatinus ENSOANG00000006138 I
ENSOARG00000011249 Ovis aries ENSOARG00000011249 I
ENSOCUG00000002797 Oryctolagus cuniculus ENSOCUG00000002797 I
ENSOCUG00000016044 Oryctolagus cuniculus ENSOCUG00000016044 I
ENSONIG00000003362 Oreochromis niloticus ENSONIG00000003362 I
ENSONIG00000004351 Oreochromis niloticus ENSONIG00000004351 I
ENSONIG00000005962 Oreochromis niloticus ENSONIG00000005962 I
ENSONIG00000009148 Oreochromis niloticus ENSONIG00000009148 I
ENSONIG00000012931 Oreochromis niloticus ENSONIG00000012931 I
ENSORLG00000018251 Oryzias latipes ENSORLG00000018251 I
ENSP00000358207-D1 Bos grunniens ENSP00000358207-D1 I
ENSPANG00000008434 Papio anubis ENSPANG00000008434 I
ENSPANG00000020704 Papio anubis ENSPANG00000020704 I
ENSPANG00000023831 Papio anubis ENSPANG00000023831 I
ENSPFOG00000002051 Poecilia formosa ENSPFOG00000002051 I
ENSPFOG00000005831 Poecilia formosa ENSPFOG00000005831 I
ENSPFOG00000015811 Poecilia formosa ENSPFOG00000015811 I
ENSPFOG00000016537 Poecilia formosa ENSPFOG00000016537 I
ENSPMAG00000001023 Petromyzon marinus ENSPMAG00000001023 I
ENSPMAG00000006770 Petromyzon marinus ENSPMAG00000006770 I
ENSPPYG00000012317 Pongo abelii ENSPPYG00000012317 I
ENSPPYG00000018223 Pongo abelii ENSPPYG00000018223 I
ENSPSIG00000014288 Pelodiscus sinensis ENSPSIG00000014288 I
ENSSHAG00000005517 Sarcophilus harrisii ENSSHAG00000005517 I
ENSSHAG00000016892 Sarcophilus harrisii ENSSHAG00000016892 I
ENSSHAG00000018063 Sarcophilus harrisii ENSSHAG00000018063 I
ENSSSCG00000010670 Sus scrofa ENSSSCG00000010670 I
ENSSTOG00000004788 Ictidomys tridecemlineatus ENSSTOG00000004788 I
ENSSTOG00000007595 Ictidomys tridecemlineatus ENSSTOG00000007595 I
ENSSTOG00000023466 Ictidomys tridecemlineatus ENSSTOG00000023466 I
ENSTGUG00000000706 Taeniopygia guttata ENSTGUG00000000706 I
ENSTGUG00000005702 Taeniopygia guttata ENSTGUG00000005702 I
ENSTGUG00000011051 Taeniopygia guttata ENSTGUG00000011051 I
ENSTNIG00000017046 Tetraodon nigroviridis ENSTNIG00000017046 I
ENSXMAG00000001850 Xiphophorus maculatus ENSXMAG00000001850 I
ENSXMAG00000002449 Xiphophorus maculatus ENSXMAG00000002449 I
estExt_fgenesh2_kg.C_1370001 Branchiostoma floridae estExt_fgenesh2_kg.C_1370001 I
estExt_fgenesh2_pg.C_1690055 Branchiostoma floridae estExt_fgenesh2_pg.C_1690055 I
estExt_fgenesh2_pg.C_600126 Branchiostoma floridae estExt_fgenesh2_pg.C_600126 I
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N
Esx1 Rattus norvegicus ENSRNOG00000048011 I
exex Drosophila melanogaster FBgn0041156 D
e_gw.601.16.1 Branchiostoma floridae e_gw.601.16.1 I
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N
fgenesh1_pm.C_chr_2.1000191 Pichia stipitis fgenesh1_pm.C_chr_2.1000191 I
GA20934 Drosophila pseudoobscura FBgn0080923 I
GB54763 Apis mellifera GB54763 I
GD14043 Drosophila simulans FBgn0185738 I
GE21647 Drosophila yakuba FBgn0238897 I
GF23802 Drosophila ananassae FBgn0100796 I
Gfo_R001263 Geospiza fortis Gfo_R001263 I
GG14457 Drosophila erecta FBgn0106716 I
GH14983 Drosophila grimshawi FBgn0122458 I
GI13145 Drosophila mojavensis FBgn0135902 I
GJ13893 Drosophila virilis FBgn0201112 I
GK20585 Drosophila willistoni FBgn0222581 I
GL18045 Drosophila persimilis FBgn0155648 I
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N
GM25007 Drosophila sechellia FBgn0179868 I
HDID_0000586201 Hymenolepis diminuta HDID_0000586201 I
HelroG147264 Helobdella robusta HelroG147264 I
HelroG178674 Helobdella robusta HelroG178674 N
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N
HHAL005315-PA Halyomorpha halys HHAL005315-PA I
HMEL013615 Heliconius melpomene HMEL013615 I
HMEL014287 Heliconius melpomene HMEL014287 I
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N
Hsal_01792--XP_394125.3_APIME Harpegnathos saltator Hsal_01792--XP_394125.3_APIME I
ISCW018031 Ixodes scapularis ISCW018031 I
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N
KGM_12980 Danaus plexippus KGM_12980 I
KLLA0_B11495g Kluyveromyces lactis KLLA0_B11495g N
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N
Kwal_9519 Kluyveromyces waltii Kwal_9519 N
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N
LCUP015966 Lucilia cuprina LCUP015966 I
LHX5 Myotis lucifugus ENSMLUG00000009388 I
LLOJ001010 Lutzomyia longipalpis LLOJ001010 I
LotgiG100387 Lottia gigantea LotgiG100387 I
LotgiG79485 Lottia gigantea LotgiG79485 I
M378DRAFT_41557 Amanita muscaria M378DRAFT_41557 N
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N
MCINX003623 Melitaea cinxia MCINX003623 I
MDOA002512 Musca domestica MDOA002512 I
MESCA004759 Megaselia scalaris MESCA004759 I
MhA1_Contig899.frz3.gene1 Meloidogyne hapla MhA1_Contig899.frz3.gene1 I
ML00268a Mnemiopsis leidyi ML00268a I
MNX1 Homo sapiens ENSG00000130675 D
mnx1 Gasterosteus aculeatus ENSGACG00000003933 I
MNX1 Myotis lucifugus ENSMLUG00000005453 I
MNX1 Monodelphis domestica ENSMODG00000005191 I
Mnx1 Mus musculus ENSMUSG00000001566 D
MNX1 Otolemur garnettii ENSOGAG00000026453 I
mnx1 Oryzias latipes ENSORLG00000010549 I
MNX1 Pan troglodytes ENSPTRG00000019918 I
Mnx1 Rattus norvegicus ENSRNOG00000046959 I
MNX1 Sus scrofa ENSSSCG00000016410 I
mnx1 Tetraodon nigroviridis ENSTNIG00000012784 I
mnx1 Takifugu rubripes ENSTRUG00000010178 I
mnx1 Xenopus tropicalis XB-GENE-919890 I
mnx1.L Xenopus laevis XB-GENE-1113190 I
mnx1.S Xenopus laevis XB-GENE-17345444 I
mnx2b Gasterosteus aculeatus ENSGACG00000015160 I
mnx2b Oryzias latipes ENSORLG00000003773 I
mnx2b Tetraodon nigroviridis ENSTNIG00000009481 I
mnx2b Takifugu rubripes ENSTRUG00000004181 I
Moror_8439 Moniliophthora roreri Moror_8439 N
MPER_12197 Moniliophthora perniciosa MPER_12197 N
MVLG_01553 Microbotryum violaceum MVLG_01553 N
Myotis_brandtii_VAX1_10024932 Myotis brandtii Myotis_brandtii_VAX1_10024932 I
Ogr11862 Ophisaurus gracilis Ogr11862 I
Ogr12822 Ophisaurus gracilis Ogr12822 I
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N
PHUM035300 Pediculus humanus PHUM035300 I
PICST_34942 Scheffersomyces stipitis PICST_34942 I
Pvit_04420 Pogona vitticeps Pvit_04420 I
Pvit_07264 Pogona vitticeps Pvit_07264 I
Pvit_08787 Pogona vitticeps Pvit_08787 I
Pvit_16024 Pogona vitticeps Pvit_16024 I
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N
Sakowv30006172m.g Saccoglossus kowalevskii Sakowv30006172m.g I
SBAD_0000513701 Soboliphyme baturini SBAD_0000513701 I
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N
SCUD_0001749601 Schistosoma curassoni SCUD_0001749601 I
SMAR006976 Strigamia maritima SMAR006976 I
Smp_126190 Schistosoma mansoni Smp_126190 I
SMRZ_0000470801 Schistosoma margrebowiei SMRZ_0000470801 I
SMU15028895 Schmidtea mediterranea SMU15028895 I
SPU_002816 Strongylocentrotus purpuratus SPU_002816 I
SPU_002964 Strongylocentrotus purpuratus SPU_002964 I
SPU_004787 Strongylocentrotus purpuratus SPU_004787 I
sr12520 Sporisorium reilianum sr12520 N
T265_08787 Opisthorchis viverrini T265_08787 I
TC009461 Tribolium castaneum TC009461 I
tetur05g01910 Tetranychus urticae tetur05g01910 I
tetur32g01060 Tetranychus urticae tetur32g01060 I
TMUE_s0091002700 Trichuris muris TMUE_s0091002700 I
TriadG50911 Trichoplax adhaerens TriadG50911 I
TSTA_110260 Talaromyces stipitatus TSTA_110260 N
TTRE_0000646501 Trichuris trichiura TTRE_0000646501 I
VAX1 Canis familiaris ENSCAFG00000011912 I
VAX1 Callithrix jacchus ENSCJAG00000019496 I
VAX1 Cavia porcellus ENSCPOG00000000542 I
vax1 Danio rerio ENSDARG00000021916 I
VAX1 Felis catus ENSFCAG00000012988 I
VAX1 Homo sapiens ENSG00000148704 D
vax1 Gasterosteus aculeatus ENSGACG00000014648 I
VAX1 Gallus gallus ENSGALG00000009261 I
VAX1 Monodelphis domestica ENSMODG00000009428 I
Vax1 Mus musculus ENSMUSG00000006270 D
VAX1 Otolemur garnettii ENSOGAG00000030974 I
VAX1 Procavia capensis ENSPCAG00000015630 I
VAX1 Pan troglodytes ENSPTRG00000002977 I
VAX1 Pteropus vampyrus ENSPVAG00000008173 I
Vax1 Rattus norvegicus ENSRNOG00000008824 I
VAX1 Sus scrofa ENSSSCG00000010666 I
vax1 Tetraodon nigroviridis ENSTNIG00000005818 I
vax1 Takifugu rubripes ENSTRUG00000017910 I
vax1 Xenopus tropicalis XB-GENE-478345 I
vax1.L Xenopus laevis XB-GENE-1188142 I
VAX2 Bos taurus ENSBTAG00000010605 I
VAX2 Cavia porcellus ENSCPOG00000019567 I
vax2 Danio rerio ENSDARG00000058702 I
VAX2 Dasypus novemcinctus ENSDNOG00000044547 I
Vax2 Dipodomys ordii ENSDORG00000014436 I
VAX2 Equus caballus ENSECAG00000019854 I
VAX2 Echinops telfairi ENSETEG00000019614 I
VAX2 Felis catus ENSFCAG00000013449 I
VAX2 Homo sapiens ENSG00000116035 D
vax2 Gasterosteus aculeatus ENSGACG00000019094 I
VAX2 Gorilla gorilla ENSGGOG00000007290 I
VAX2 Loxodonta africana ENSLAFG00000005639 I
VAX2 Myotis lucifugus ENSMLUG00000007325 I
VAX2 Macaca mulatta ENSMMUG00000002087 I
VAX2 Monodelphis domestica ENSMODG00000011251 I
Vax2 Mus musculus ENSMUSG00000034777 D
VAX2 Otolemur garnettii ENSOGAG00000015318 I
vax2 Oryzias latipes ENSORLG00000007787 I
VAX2 Pan troglodytes ENSPTRG00000012037 I
Vax2 Rattus norvegicus ENSRNOG00000013261 I
vax2 Tetraodon nigroviridis ENSTNIG00000019056 I
vax2 Takifugu rubripes ENSTRUG00000018062 I
VAX2 Tursiops truncatus ENSTTRG00000012234 I
vax2 Xenopus tropicalis XB-GENE-492923 I
vax2.L Xenopus laevis XB-GENE-492927 I
vax2.S Xenopus laevis XB-GENE-6464314 I
XP_002490100.1 Pichia pastoris XP_002490100.1 N
XP_002492281.1 Pichia pastoris XP_002492281.1 N
XP_002934006 Xenopus tropicalis XP_002934006 I
YQE_07368 Dendroctonus ponderosae YQE_07368 I