BATF3 (Echinops telfairi)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSETEG00000010953 T059620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.850 0.875
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.830 0.938
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.830 0.938
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.830 0.938
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.830 0.938
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.830 0.938
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.830 0.938
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.830 0.938
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.830 0.938
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.830 0.938
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.804 0.625
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.804 0.625
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.793 0.609
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.793 0.609
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.793 0.609
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.793 0.609
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.793 0.609
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.793 0.609
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.793 0.609
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.793 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000008884 bZIP 29 92

Links

Other bZIP family TFs
Other Echinops telfairi TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
BGIOSGA037431 Oryza indica BGIOSGA037431 N
BHLH52 Arabidopsis thaliana AT1G30670 N
BHLH53 Arabidopsis thaliana AT2G34820 N
Bo3g028090 Brassica oleracea Bo3g028090 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bo4g182930 Brassica oleracea Bo4g182930 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bra005389 Brassica rapa Bra005389 N
Bra021933 Brassica rapa Bra021933 N
Bra022993 Brassica rapa Bra022993 N
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
Ca_13608 Cicer arietinum Ca_13608 N
Ca_13610 Cicer arietinum Ca_13610 N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
F775_52642 Aegilops tauschii F775_52642 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
gene20146-v1.0-hybrid Fragaria vesca gene20146-v1.0-hybrid N
GLYMA08G17747 Glycine max GLYMA08G17747 N
GLYMA15G41400 Glycine max GLYMA15G41400 N
Gorai.005G218900 Gossypium raimondii Gorai.005G218900 N
GSMUA_Achr11G16900_001 Musa acuminata GSMUA_Achr11G16900_001 N
GSMUA_AchrUn_randomG20690_001 Musa acuminata GSMUA_AchrUn_randomG20690_001 N
Lus10005451.g Linum usitatissimum Lus10005451.g N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000280921 Malus domestica MDP0000280921 N
MDP0000791364 Malus domestica MDP0000791364 N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
OB07G14260 Oryza brachyantha OB07G14260 N
OB12G20560 Oryza brachyantha OB12G20560 N
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N
ONIVA12G13030 Oryza nivara ONIVA12G13030 N
OPUNC12G11490 Oryza punctata OPUNC12G11490 N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N
Pavir.Ca01783 Panicum virgatum Pavir.Ca01783 N
Pavir.Ca01784 Panicum virgatum Pavir.Ca01784 N
Pavir.Ia04589 Panicum virgatum Pavir.Ia04589 N
Pm010610 Prunus mume Pm010610 N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Si038598m.g Setaria italica Si038598m.g N
TCM_033386 Theobroma cacao TCM_033386 N
Thhalv10009765m.g Eutrema salsugineum Thhalv10009765m.g N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N