Afo_R000376 (Aptenodytes forsteri)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Afo_R000376 T069793_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.866 0.889
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.866 0.889
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.866 0.889
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.866 0.889
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.866 0.889
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.866 0.889
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.866 0.889
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.866 0.889
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.866 0.889
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.866 0.889
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.817 0.603
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.817 0.603
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.817 0.603
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.817 0.603
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.817 0.603
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.817 0.603
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.817 0.603
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.817 0.603
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.817 0.603
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R000376 bZIP 249 314

Links

Other bZIP family TFs
Other Aptenodytes forsteri TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.000
ANAC13 Arabidopsis thaliana AT1G32870 D 0.000
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N 0.000
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.000
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.000
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.000
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.000
Ca_04337 Cicer arietinum Ca_04337 N 0.000
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.000
Cla013854 Citrullus lanatus Cla013854 I 0.000
Cla016588 Citrullus lanatus Cla016588 N 0.000
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.000
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.000
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.000
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.000
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.000
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.000
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.000
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.000
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.000
GSMUA_AchrUn_randomG11980_001 Musa acuminata GSMUA_AchrUn_randomG11980_001 I 0.000
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N 0.000
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.000
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.000
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.000
MDP0000169485 Malus domestica MDP0000169485 I 0.000
MDP0000219488 Malus domestica MDP0000219488 N 0.000
MDP0000266908 Malus domestica MDP0000266908 I 0.000
MDP0000852271 Malus domestica MDP0000852271 I 0.000
mg018130m Mimulus guttatus mg018130m I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
MTR_1g097300 Medicago truncatula MTR_1g097300 N 0.000
PGSC0003DMG400016962 Solanum tuberosum PGSC0003DMG400016962 N 0.000
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.000
Pm022358 Prunus mume Pm022358 N 0.000
Pm029581 Prunus mume Pm029581 I 0.000
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.000
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.000
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.000
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.000
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.000
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.000
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.000
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.000
Solyc12g056790.1 Solanum lycopersicum Solyc12g056790.1 I 0.000
TCM_036587 Theobroma cacao TCM_036587 I 0.000
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.000
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.000