CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_10005
(
Colletotrichum higginsianum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CH063_10005
T083669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.822
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF39074
C2H2 ZF
30
52
YKCQFCNRAFSRSEHRSRHERSH
CCF39074
C2H2 ZF
58
81
FKCMKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Colletotrichum higginsianum
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29216.m000261
Ricinus communis
29216.m000261
I
0.000
30149.m000231
Ricinus communis
30149.m000231
I
0.000
30152.m002405
Ricinus communis
30152.m002405
I
0.000
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.000
Aquca_058_00134
Aquilegia coerulea
Aquca_058_00134
I
0.000
AT2G43140
Arabidopsis thaliana
AT2G43140
I
0.000
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
0.000
BGIOSGA016651
Oryza indica
BGIOSGA016651
I
0.000
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
0.000
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
0.000
BHLH122
Arabidopsis thaliana
AT1G51140
D
0.000
BHLH80
Arabidopsis thaliana
AT1G35460
D
0.000
BHLH81
Arabidopsis thaliana
AT4G09180
I
0.000
Bo3g036400
Brassica oleracea
Bo3g036400
I
0.000
Bo4g019620
Brassica oleracea
Bo4g019620
I
0.000
Bo4g191390
Brassica oleracea
Bo4g191390
I
0.000
Bo4g194080
Brassica oleracea
Bo4g194080
N
0.000
Bo6g024810
Brassica oleracea
Bo6g024810
I
0.000
Bo6g043840
Brassica oleracea
Bo6g043840
I
0.000
Bo8g026850
Brassica oleracea
Bo8g026850
I
0.000
Bostr.1774s0027
Boechera stricta
Bostr.1774s0027
I
0.000
Bostr.25463s0393
Boechera stricta
Bostr.25463s0393
I
0.000
Bostr.25993s0461
Boechera stricta
Bostr.25993s0461
I
0.000
Bostr.26675s0074
Boechera stricta
Bostr.26675s0074
I
0.000
Bra000291
Brassica rapa
Bra000291
I
0.000
Bra004748
Brassica rapa
Bra004748
I
0.000
Bra016886
Brassica rapa
Bra016886
I
0.000
Bra018896
Brassica rapa
Bra018896
I
0.000
Bra028088
Brassica rapa
Bra028088
I
0.000
Bra036760
Brassica rapa
Bra036760
I
0.000
Bra037732
Brassica rapa
Bra037732
N
0.000
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
0.000
BRADI3G48070
Brachypodium distachyon
BRADI3G48070
I
0.000
Cagra.18223s0002
Capsella grandiflora
Cagra.18223s0002
I
0.000
Cagra.2093s0006
Capsella grandiflora
Cagra.2093s0006
I
0.000
Cagra.3706s0004
Capsella grandiflora
Cagra.3706s0004
I
0.000
Cagra.9781s0002
Capsella grandiflora
Cagra.9781s0002
I
0.000
Carubv10001721m.g
Capsella rubella
Carubv10001721m.g
I
0.000
Carubv10009458m.g
Capsella rubella
Carubv10009458m.g
I
0.000
Carubv10010050m.g
Capsella rubella
Carubv10010050m.g
I
0.000
Carubv10023683m.g
Capsella rubella
Carubv10023683m.g
I
0.000
cassava13743.valid.m1
Manihot esculenta
cassava13743.valid.m1
I
0.000
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
0.000
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
0.000
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
0.000
cassava35513.valid.m1
Manihot esculenta
cassava35513.valid.m1
I
0.000
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
0.000
cassava36544.valid.m1
Manihot esculenta
cassava36544.valid.m1
I
0.000
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
0.000
Ca_02662
Cicer arietinum
Ca_02662
I
0.000
Ca_14223
Cicer arietinum
Ca_14223
I
0.000
Ca_26916
Cicer arietinum
Ca_26916
I
0.000
chr1.CM0318.250.nd
Lotus japonicus
chr1.CM0318.250.nd
I
0.000
chr5.LjT42F22.20.nc
Lotus japonicus
chr5.LjT42F22.20.nc
I
0.000
Ciclev10002083m.g
Citrus clementina
Ciclev10002083m.g
I
0.000
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
0.000
Ciclev10015437m.g
Citrus clementina
Ciclev10015437m.g
I
0.000
Ciclev10031622m.g
Citrus clementina
Ciclev10031622m.g
I
0.000
Cla015469
Citrullus lanatus
Cla015469
I
0.000
Cla017792
Citrullus lanatus
Cla017792
I
0.000
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
0.000
Cucsa.061590
Cucumis sativus
Cucsa.061590
I
0.000
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
0.000
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
0.000
Eucgr.B03669
Eucalyptus grandis
Eucgr.B03669
I
0.000
Eucgr.G03396
Eucalyptus grandis
Eucgr.G03396
I
0.000
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
0.000
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
0.000
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.000
e_gw1.34.393.1
Physcomitrella patens
e_gw1.34.393.1
I
0.000
F775_24151
Aegilops tauschii
F775_24151
I
0.000
fgenesh2_kg.1__4183__AT1G51140.1
Arabidopsis lyrata
fgenesh2_kg.1__4183__AT1G51140.1
I
0.000
fgenesh2_kg.4__2475__AT2G43140.1
Arabidopsis lyrata
fgenesh2_kg.4__2475__AT2G43140.1
I
0.000
fgenesh2_kg.6__2924__AT4G09180.1
Arabidopsis lyrata
fgenesh2_kg.6__2924__AT4G09180.1
I
0.000
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
0.000
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
0.000
gene26880-v1.0-hybrid
Fragaria vesca
gene26880-v1.0-hybrid
I
0.000
gene26967-v1.0-hybrid
Fragaria vesca
gene26967-v1.0-hybrid
I
0.000
GLYMA02G29830
Glycine max
GLYMA02G29830
I
0.000
GLYMA08G16190
Glycine max
GLYMA08G16190
I
0.000
GLYMA08G26110
Glycine max
GLYMA08G26110
I
0.000
GLYMA10G12150
Glycine max
GLYMA10G12150
I
0.000
GLYMA11G13960
Glycine max
GLYMA11G13960
I
0.000
GLYMA12G05930
Glycine max
GLYMA12G05930
I
0.000
GLYMA12G36750
Glycine max
GLYMA12G36750
I
0.000
GLYMA13G27455
Glycine max
GLYMA13G27455
I
0.000
GLYMA13G41670
Glycine max
GLYMA13G41670
I
0.000
GLYMA15G03740
Glycine max
GLYMA15G03740
I
0.000
GLYMA15G42680
Glycine max
GLYMA15G42680
I
0.000
GLYMA19G32600
Glycine max
GLYMA19G32600
I
0.000
GLYMA20G39220
Glycine max
GLYMA20G39220
I
0.000
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
0.000
Gorai.004G035800
Gossypium raimondii
Gorai.004G035800
I
0.000
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.000
Gorai.009G071900
Gossypium raimondii
Gorai.009G071900
I
0.000
Gorai.011G144600
Gossypium raimondii
Gorai.011G144600
I
0.000
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
0.000
GRMZM2G085467
Zea mays
GRMZM2G085467
I
0.000
GRMZM2G417597
Zea mays
GRMZM2G417597
I
0.000
GRMZM2G437481
Zea mays
GRMZM2G437481
I
0.000
GSMUA_Achr3G11110_001
Musa acuminata
GSMUA_Achr3G11110_001
I
0.000
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
0.000
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
0.000
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
0.000
GSMUA_Achr9G27780_001
Musa acuminata
GSMUA_Achr9G27780_001
I
0.000
gw1.185.89.1
Physcomitrella patens
gw1.185.89.1
I
0.000
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
0.000
LPERR04G13560
Leersia perrieri
LPERR04G13560
I
0.000
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
0.000
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
0.000
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
0.000
MDP0000180376
Malus domestica
MDP0000180376
I
0.000
MDP0000269890
Malus domestica
MDP0000269890
I
0.000
MDP0000273574
Malus domestica
MDP0000273574
I
0.000
mgf002701m
Mimulus guttatus
mgf002701m
I
0.000
mgf005043m
Mimulus guttatus
mgf005043m
I
0.000
mgf016734m
Mimulus guttatus
mgf016734m
I
0.000
mgf018372m
Mimulus guttatus
mgf018372m
N
0.000
MLOC_12058
Hordeum vulgare
MLOC_12058
I
0.000
MLOC_67834
Hordeum vulgare
MLOC_67834
I
0.000
MTR_2g098310
Medicago truncatula
MTR_2g098310
I
0.000
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
0.000
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
0.000
OB04G24170
Oryza brachyantha
OB04G24170
I
0.000
OB08G26810
Oryza brachyantha
OB08G26810
I
0.000
OBART02G23210
Oryza barthii
OBART02G23210
I
0.000
OBART04G16900
Oryza barthii
OBART04G16900
I
0.000
OBART08G19860
Oryza barthii
OBART08G19860
I
0.000
OBART09G14660
Oryza barthii
OBART09G14660
I
0.000
OGLUM04G16920
Oryza glumaepatula
OGLUM04G16920
I
0.000
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
0.000
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
0.000
OLONG_009256
Oryza longistaminata
OLONG_009256
I
0.000
OLONG_017566
Oryza longistaminata
OLONG_017566
I
0.000
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
0.000
OMERI04G14260
Oryza meridionalis
OMERI04G14260
I
0.000
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
0.000
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
0.000
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
0.000
ONIVA04G15000
Oryza nivara
ONIVA04G15000
I
0.000
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
0.000
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
0.000
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
0.000
OPUNC04G14700
Oryza punctata
OPUNC04G14700
I
0.000
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
0.000
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
0.000
orange1.1g015337m.g
Citrus sinensis
orange1.1g015337m.g
I
0.000
orange1.1g016638m.g
Citrus sinensis
orange1.1g016638m.g
I
0.000
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
0.000
orange1.1g023215m.g
Citrus sinensis
orange1.1g023215m.g
I
0.000
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
0.000
ORGLA04G0140000
Oryza glaberrima
ORGLA04G0140000
I
0.000
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
0.000
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
0.000
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
0.000
ORUFI04G18350
Oryza rufipogon
ORUFI04G18350
I
0.000
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
0.000
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
0.000
OS04G0489600
Oryza sativa
OS04G0489600
I
0.000
OS08G0506700
Oryza sativa
OS08G0506700
D
0.000
OS09G0487900
Oryza sativa
OS09G0487900
I
0.000
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
0.000
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
0.000
Pavir.Ba01718
Panicum virgatum
Pavir.Ba01718
I
0.000
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
0.000
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
0.000
Pavir.J00377
Panicum virgatum
Pavir.J00377
I
0.000
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
0.000
Pavir.J14004
Panicum virgatum
Pavir.J14004
I
0.000
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
0.000
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
0.000
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
0.000
PGSC0003DMG400006569
Solanum tuberosum
PGSC0003DMG400006569
I
0.000
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
0.000
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
0.000
PGSC0003DMG400031314
Solanum tuberosum
PGSC0003DMG400031314
I
0.000
PK06301.1
Cannabis sativa
PK06301.1
I
0.000
PK07850.1
Cannabis sativa
PK07850.1
I
0.000
PK18038.1
Cannabis sativa
PK18038.1
I
0.000
PK20089.1
Cannabis sativa
PK20089.1
I
0.000
Pm000447
Prunus mume
Pm000447
I
0.000
Pm004181
Prunus mume
Pm004181
I
0.000
Pm007619
Prunus mume
Pm007619
I
0.000
Pm016406
Prunus mume
Pm016406
I
0.000
Pm025821
Prunus mume
Pm025821
I
0.000
POPTR_0001s27680
Populus trichocarpa
POPTR_0001s27680
I
0.000
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
0.000
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
0.000
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
0.000
PRUPE_ppa006134mg
Prunus persica
PRUPE_ppa006134mg
I
0.000
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
0.000
PRUPE_ppa011017mg
Prunus persica
PRUPE_ppa011017mg
I
0.000
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
0.000
PRUPE_ppa025178mg
Prunus persica
PRUPE_ppa025178mg
I
0.000
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
0.000
SapurV1A.0027s0090
Salix purpurea
SapurV1A.0027s0090
I
0.000
SapurV1A.0071s0010
Salix purpurea
SapurV1A.0071s0010
I
0.000
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.000
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
0.000
SapurV1A.0391s0050
Salix purpurea
SapurV1A.0391s0050
I
0.000
SapurV1A.0402s0180
Salix purpurea
SapurV1A.0402s0180
I
0.000
SapurV1A.0529s0060
Salix purpurea
SapurV1A.0529s0060
I
0.000
SapurV1A.0690s0120
Salix purpurea
SapurV1A.0690s0120
I
0.000
SapurV1A.1647s0020
Salix purpurea
SapurV1A.1647s0020
I
0.000
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.000
Sb02g028300
Sorghum bicolor
Sb02g028300
I
0.000
Sb04g025260
Sorghum bicolor
Sb04g025260
I
0.000
Sb06g020810
Sorghum bicolor
Sb06g020810
I
0.000
scaffold_103992.1
Arabidopsis lyrata
scaffold_103992.1
I
0.000
Si010513m.g
Setaria italica
Si010513m.g
I
0.000
Si017194m.g
Setaria italica
Si017194m.g
I
0.000
Si029614m.g
Setaria italica
Si029614m.g
I
0.000
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
0.000
Solyc06g065040.2
Solanum lycopersicum
Solyc06g065040.2
I
0.000
Solyc09g098110.2
Solanum lycopersicum
Solyc09g098110.2
I
0.000
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
0.000
TCM_005925
Theobroma cacao
TCM_005925
I
0.000
TCM_020066
Theobroma cacao
TCM_020066
I
0.000
TCM_024842
Theobroma cacao
TCM_024842
I
0.000
TCM_036484
Theobroma cacao
TCM_036484
I
0.000
TCM_040564
Theobroma cacao
TCM_040564
I
0.000
Thhalv10011463m.g
Eutrema salsugineum
Thhalv10011463m.g
I
0.000
Thhalv10016998m.g
Eutrema salsugineum
Thhalv10016998m.g
I
0.000
Thhalv10028883m.g
Eutrema salsugineum
Thhalv10028883m.g
I
0.000
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
0.000
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
0.000
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
0.000
VIT_05s0124g00240
Vitis vinifera
VIT_05s0124g00240
I
0.000
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
0.000
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
0.000
VIT_18s0041g00690
Vitis vinifera
VIT_18s0041g00690
I
0.000