CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000006472
(
Tarsius syrichta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTSYG00000006472
T112684_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IKZF2
M10105_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.827
1.000
IKZF2
M10106_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.827
1.000
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.804
0.924
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.804
0.913
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.804
0.913
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.804
0.913
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.804
0.913
IKZF1
M10304_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.804
0.913
IKZF1
M10305_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.804
0.913
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA
TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.804
0.913
IKZF3
M08320_2.00
Homo sapiens
TTCCCNNSB
VSNNGGGAA
ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE
0.776
0.837
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000005926
C2H2 ZF
116
138
LKCDVCGMVCIGPNVLMVHKRSH
ENSTSYP00000005926
C2H2 ZF
144
166
FHCNQCGASFTQKGNLLRHIKLH
ENSTSYP00000005926
C2H2 ZF
172
194
FKCPFCSYACRRRDALTGHLRTH
ENSTSYP00000005926
C2H2 ZF
200
223
HKCNYCGRSYKQRSSLEEHKERCH
Links
Other
C2H2 ZF
family TFs
Other
Tarsius syrichta
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
cassava18077.valid.m1
Manihot esculenta
cassava18077.valid.m1
N
cassava18078.valid.m1
Manihot esculenta
cassava18078.valid.m1
N
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
chr4.CM0387.290.nc
Lotus japonicus
chr4.CM0387.290.nc
N
Ciclev10015354m.g
Citrus clementina
Ciclev10015354m.g
N
Cla005911
Citrullus lanatus
Cla005911
N
Cucsa.026600
Cucumis sativus
Cucsa.026600
N
Eucgr.G02067
Eucalyptus grandis
Eucgr.G02067
N
evm.TU.supercontig_2.121
Carica papaya
evm.TU.supercontig_2.121
N
gene00620-v1.0-hybrid
Fragaria vesca
gene00620-v1.0-hybrid
N
GLYMA05G26790
Glycine max
GLYMA05G26790
N
GLYMA08G09780
Glycine max
GLYMA08G09780
N
Gorai.002G171200
Gossypium raimondii
Gorai.002G171200
N
Gorai.005G154200
Gossypium raimondii
Gorai.005G154200
N
Gorai.012G183100
Gossypium raimondii
Gorai.012G183100
N
Lus10023543.g
Linum usitatissimum
Lus10023543.g
N
Lus10040427.g
Linum usitatissimum
Lus10040427.g
N
MDP0000320521
Malus domestica
MDP0000320521
N
MDP0000826219
Malus domestica
MDP0000826219
N
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
orange1.1g022806m.g
Citrus sinensis
orange1.1g022806m.g
N
PK28293.1
Cannabis sativa
PK28293.1
N
Pm005924
Prunus mume
Pm005924
N
POPTR_0008s13960
Populus trichocarpa
POPTR_0008s13960
N
POPTR_0010s11180
Populus trichocarpa
POPTR_0010s11180
N
PRUPE_ppa009765mg
Prunus persica
PRUPE_ppa009765mg
N
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
SapurV1A.0015s0840
Salix purpurea
SapurV1A.0015s0840
N
SapurV1A.0055s0040
Salix purpurea
SapurV1A.0055s0040
N
TCM_011212
Theobroma cacao
TCM_011212
N
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
VIT_01s0011g06380
Vitis vinifera
VIT_01s0011g06380
N
VIT_17s0000g01860
Vitis vinifera
VIT_17s0000g01860
N