ENSXMAG00000018241 (Xiphophorus maculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSXMAG00000018241 T114033_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.779 0.934
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.779 0.934
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.779 0.934
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.779 0.934
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.779 0.934
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.779 0.934
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.779 0.934
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.779 0.934
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.779 0.934
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000018278 C2H2 ZF 381 403
ENSXMAP00000018278 C2H2 ZF 422 443
ENSXMAP00000018278 C2H2 ZF 449 471
ENSXMAP00000018278 C2H2 ZF 477 500

Links

Other C2H2 ZF family TFs
Other Xiphophorus maculatus TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30055.m001542 Ricinus communis 30055.m001542 N 0.000
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.000
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.000
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.000
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.000
BGIOSGA000452 Oryza indica BGIOSGA000452 N 0.000
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.000
Bo5g081360 Brassica oleracea Bo5g081360 N 0.000
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.000
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N 0.000
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.000
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.000
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.000
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.000
Ca_07051 Cicer arietinum Ca_07051 N 0.000
Ca_16482 Cicer arietinum Ca_16482 N 0.000
Ca_24699 Cicer arietinum Ca_24699 N 0.000
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.000
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.000
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.000
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.000
Cla000184 Citrullus lanatus Cla000184 N 0.000
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.000
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.000
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N 0.000
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.000
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.000
F775_11193 Aegilops tauschii F775_11193 N 0.000
F775_14972 Aegilops tauschii F775_14972 N 0.000
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.000
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.000
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.000
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.000
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.000
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.000
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.000
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.000
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.000
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.000
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.000
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.000
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.000
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.000
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.000
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.000
LPERR01G32600 Leersia perrieri LPERR01G32600 N 0.000
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.000
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.000
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.000
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.000
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.000
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.000
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.000
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.000
MDP0000131949 Malus domestica MDP0000131949 N 0.000
MDP0000300013 Malus domestica MDP0000300013 N 0.000
MDP0000303483 Malus domestica MDP0000303483 N 0.000
MDP0000899280 Malus domestica MDP0000899280 N 0.000
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.000
OB05G26090 Oryza brachyantha OB05G26090 N 0.000
OB08G26650 Oryza brachyantha OB08G26650 N 0.000
OBART01G37960 Oryza barthii OBART01G37960 N 0.000
OBART02G07320 Oryza barthii OBART02G07320 N 0.000
OBART08G19670 Oryza barthii OBART08G19670 N 0.000
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N 0.000
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.000
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.000
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.000
OMERI01G34920 Oryza meridionalis OMERI01G34920 N 0.000
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.000
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.000
ONIVA04G25710 Oryza nivara ONIVA04G25710 N 0.000
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.000
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.000
OPUNC01G36780 Oryza punctata OPUNC01G36780 N 0.000
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.000
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.000
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.000
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.000
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N 0.000
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.000
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.000
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.000
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N 0.000
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.000
OS01G0859100 Oryza sativa OS01G0859100 N 0.000
OS08G0504000 Oryza sativa OS08G0504000 N 0.000
OS09G0485600 Oryza sativa OS09G0485600 N 0.000
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.000
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.000
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.000
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.000
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.000
PK05257.1 Cannabis sativa PK05257.1 N 0.000
Pm001374 Prunus mume Pm001374 N 0.000
Pm029018 Prunus mume Pm029018 N 0.000
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.000
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.000
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.000
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.000
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.000
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.000
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.000
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.000
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.000
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.000
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.000
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.000
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.000
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.000
Si013819m.g Setaria italica Si013819m.g N 0.000
Si022296m.g Setaria italica Si022296m.g N 0.000
Si029897m.g Setaria italica Si029897m.g N 0.000
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.000
TCM_011858 Theobroma cacao TCM_011858 N 0.000
TCM_041441 Theobroma cacao TCM_041441 N 0.000
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N 0.000
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.000
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.000
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.000
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.000
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.000