SU7_3626 (Saccharomyces arboricola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SU7_3626 T129879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.827 0.978
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.827 0.978
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.827 0.978
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.827 0.978
YPR015C
M01540_2.00 		Saccharomyces cerevisiae
YTSBBBN
NVVVSAR		 PBM
Zhu et al.(2009)
Ypr015c 		0.776 0.848
YPR015C
M08546_2.00 		Saccharomyces cerevisiae
BNNNDVCGTAAATCMYNDHH
DDHNRKGATTTACGBHNNNV		 Misc
DeBoer et al.(2011)
YPR015C_871 		0.776 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS41316 C2H2 ZF 254 276
EJS41316 C2H2 ZF 282 306

Links

Other C2H2 ZF family TFs
Other Saccharomyces arboricola TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001268 I
AtMYB103 Vitis vinifera VIT_19s0015g01280 I
BGIOSGA009746 Oryza indica BGIOSGA009746 I
BGIOSGA014912 Oryza indica BGIOSGA014912 I
BGIOSGA030830 Oryza indica BGIOSGA030830 I
Bo1g051220 Brassica oleracea Bo1g051220 I
Bo2g036530 Brassica oleracea Bo2g036530 I
Bo9g123440 Brassica oleracea Bo9g123440 I
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I
Bra002847 Brassica rapa Bra002847 I
Bra026281 Brassica rapa Bra026281 I
Bra035604 Brassica rapa Bra035604 I
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I
Carubv10027619m.g Capsella rubella Carubv10027619m.g I
cassava25562.m1 Manihot esculenta cassava25562.m1 I
cassava33918.m1 Manihot esculenta cassava33918.m1 I
cassava46793.m1 Manihot esculenta cassava46793.m1 I
Ca_02249 Cicer arietinum Ca_02249 I
Ca_09203 Cicer arietinum Ca_09203 I
Ca_17657 Cicer arietinum Ca_17657 I
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I
Cla004524 Citrullus lanatus Cla004524 I
Cla007838 Citrullus lanatus Cla007838 I
Cla014272 Citrullus lanatus Cla014272 I
Cla021213 Citrullus lanatus Cla021213 I
Cucsa.041880 Cucumis sativus Cucsa.041880 I
Cucsa.103470 Cucumis sativus Cucsa.103470 I
Cucsa.148040 Cucumis sativus Cucsa.148040 I
Cucsa.353120 Cucumis sativus Cucsa.353120 I
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I
F775_22620 Aegilops tauschii F775_22620 I
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I
GLYMA01G40411 Glycine max GLYMA01G40411 I
GLYMA04G05170 Glycine max GLYMA04G05170 I
GLYMA06G05260 Glycine max GLYMA06G05260 I
GLYMA11G04880 Glycine max GLYMA11G04880 I
GLYMA18G07960 Glycine max GLYMA18G07960 I
GLYMA19G36830 Glycine max GLYMA19G36830 I
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I
GRMZM2G173633 Zea mays GRMZM2G173633 I
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I
LPERR03G29970 Leersia perrieri LPERR03G29970 I
LPERR04G12420 Leersia perrieri LPERR04G12420 I
Lus10007248.g Linum usitatissimum Lus10007248.g I
Lus10028248.g Linum usitatissimum Lus10028248.g I
MDP0000124992 Malus domestica MDP0000124992 I
MDP0000262514 Malus domestica MDP0000262514 I
MDP0000786507 Malus domestica MDP0000786507 I
MTR_1g017140 Medicago truncatula MTR_1g017140 I
MTR_3g461490 Medicago truncatula MTR_3g461490 I
MTR_4g097570 Medicago truncatula MTR_4g097570 I
MTR_5g014990 Medicago truncatula MTR_5g014990 I
MYB36 Vitis vinifera VIT_11s0052g01490 I
MYB80 Arabidopsis thaliana AT5G56110 D
OB03G42660 Oryza brachyantha OB03G42660 I
OB04G23000 Oryza brachyantha OB04G23000 I
OBART03G35660 Oryza barthii OBART03G35660 I
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I
OLONG_025560 Oryza longistaminata OLONG_025560 I
OMERI03G32880 Oryza meridionalis OMERI03G32880 I
OMERI04G13500 Oryza meridionalis OMERI04G13500 I
ONIVA03G37150 Oryza nivara ONIVA03G37150 I
ONIVA04G13800 Oryza nivara ONIVA04G13800 I
OPUNC04G13560 Oryza punctata OPUNC04G13560 I
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I
OS03G0771100 Oryza sativa OS03G0771100 I
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I
Pavir.J28142 Panicum virgatum Pavir.J28142 I
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I
Sb01g006800 Sorghum bicolor Sb01g006800 I
Sb06g019650 Sorghum bicolor Sb06g019650 I
Si012130m.g Setaria italica Si012130m.g I
Si036681m.g Setaria italica Si036681m.g I
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I
TCM_030529 Theobroma cacao TCM_030529 I
TCM_034634 Theobroma cacao TCM_034634 I
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I
TRIUR3_35325 Triticum urartu TRIUR3_35325 I
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I