Ocbimv22039583m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22039583m.g T142147_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.792 0.842
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.792 0.842
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.792 0.842
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.792 0.842
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.778 0.816
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.778 0.816
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.778 0.816
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.774 0.860
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.774 0.860
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.774 0.860
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.774 0.860
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.764 0.816
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.764 0.816
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.764 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22039583m.p C2H2 ZF 122 144
Ocbimv22039583m.p C2H2 ZF 153 175
Ocbimv22039583m.p C2H2 ZF 179 201
Ocbimv22039583m.p C2H2 ZF 207 229
Ocbimv22039583m.p C2H2 ZF 235 256

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005176 Aedes aegypti AAEL005176 I 0.790
AAEL009230 Aedes aegypti AAEL009230 I 0.778
AAEL014359 Aedes aegypti AAEL014359 I 0.778
AATE010651 Anopheles atroparvus AATE010651 I 0.778
AATE020159 Anopheles atroparvus AATE020159 I 0.790
ACHR010032 Anopheles christyi ACHR010032 I 0.790
ACOM031677 Anopheles coluzzii ACOM031677 I 0.778
ACOM031685 Anopheles coluzzii ACOM031685 I 0.790
ACUA003488 Anopheles culicifacies ACUA003488 I 0.778
ACUA020861 Anopheles culicifacies ACUA020861 I 0.778
ACUA022497 Anopheles culicifacies ACUA022497 I 0.790
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.782
AFAF007486 Anopheles farauti AFAF007486 I 0.790
AFAF017001 Anopheles farauti AFAF017001 I 0.778
AFUN001835 Anopheles funestus AFUN001835 I 0.778
AFUN002786 Anopheles funestus AFUN002786 I 0.790
AGAP006791 Anopheles gambiae AGAP006791 I 0.790
AGAP006794 Anopheles gambiae AGAP006794 I 0.778
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.773
AMEC013076 Anopheles melas AMEC013076 I 0.790
AMEC015586 Anopheles melas AMEC015586 I 0.778
AMEM013788 Anopheles merus AMEM013788 I 0.790
AMEM017035 Anopheles merus AMEM017035 I 0.778
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.790
ASIS012063 Anopheles sinensis ASIS012063 I 0.778
ASIS022059 Anopheles sinensis ASIS022059 I 0.790
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.778
A_07725 Schistosoma haematobium A_07725 I 0.792
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.780
BGLB009896 Biomphalaria glabrata BGLB009896 I 0.766
CapteG149623 Capitella teleta CapteG149623 I 0.794
CapteG176021 Capitella teleta CapteG176021 I 0.787
CapteG223614 Capitella teleta CapteG223614 I 0.802
CapteG76620 Capitella teleta CapteG76620 I 0.787
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.792
CG12605 Drosophila melanogaster FBgn0035481 D 0.778
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.815
CLEC001353 Cimex lectularius CLEC001353 I 0.790
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.791
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.778
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.790
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.778
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.790
csin111588 Clonorchis sinensis csin111588 I 0.794
D915_06717 Fasciola hepatica D915_06717 I 0.787
D917_06340 Trichinella nativa D917_06340 I 0.792
D918_03987 Trichuris suis D918_03987 I 0.798
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.778
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.769
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.787
EFV52761 Trichinella spiralis EFV52761 I 0.792
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.774
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.807
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.777
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.788
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.799
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.774
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.774
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I 0.764
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.793
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I 0.764
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.807
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.779
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.805
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.782
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.805
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.779
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I 0.764
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I 0.764
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.774
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.774
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.805
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.786
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.805
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.774
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.805
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.788
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.807
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.772
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.774
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.788
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.807
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.805
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.803
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.775
GA11715 Drosophila pseudoobscura FBgn0071765 I 0.778
GD13304 Drosophila simulans FBgn0185023 I 0.778
GD13305 Drosophila simulans FBgn0185024 I 0.778
GD13794 Drosophila simulans FBgn0185494 I 0.792
GE20660 Drosophila yakuba FBgn0237965 I 0.778
GE21392 Drosophila yakuba FBgn0238652 I 0.792
GF24781 Drosophila ananassae FBgn0101774 I 0.778
GF25020 Drosophila ananassae FBgn0102012 I 0.792
GG14232 Drosophila erecta FBgn0106493 I 0.778
GG15174 Drosophila erecta FBgn0107427 I 0.792
GH15771 Drosophila grimshawi FBgn0123242 I 0.792
GI12551 Drosophila mojavensis FBgn0135308 I 0.792
GI12763 Drosophila mojavensis FBgn0135520 I 0.775
GJ16103 Drosophila virilis FBgn0203288 I 0.792
GJ16104 Drosophila virilis FBgn0203289 I 0.775
GK16692 Drosophila willistoni FBgn0218694 I 0.778
GK17507 Drosophila willistoni FBgn0219506 I 0.792
GM11368 Drosophila sechellia FBgn0166311 I 0.792
GM14024 Drosophila sechellia FBgn0168953 I 0.778
GM14603 Drosophila sechellia FBgn0169524 I 0.792
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.790
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.780
HMEL014701 Heliconius melpomene HMEL014701 I 0.780
ISCW021315 Ixodes scapularis ISCW021315 I 0.792
KGM_21493 Danaus plexippus KGM_21493 I 0.780
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.773
L798_11766 Zootermopsis nevadensis L798_11766 I 0.790
L889_g21793 Steinernema feltiae L889_g21793 I 0.774
L892_g9690 Steinernema scapterisci L892_g9690 I 0.773
L893_g27175 Steinernema glaseri L893_g27175 I 0.769
L898_g5709 Steinernema monticolum L898_g5709 I 0.774
LCUP005777 Lucilia cuprina LCUP005777 I 0.766
LCUP005780 Lucilia cuprina LCUP005780 I 0.792
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.790
LOAG_08891 Loa loa LOAG_08891 I 0.761
LotgiG58520 Lottia gigantea LotgiG58520 I 0.774
MCINX009925 Melitaea cinxia MCINX009925 I 0.780
MDOA001622 Musca domestica MDOA001622 I 0.764
MDOA005810 Musca domestica MDOA005810 I 0.792
MESCA005876 Megaselia scalaris MESCA005876 I 0.766
NEMVEDRAFT_v1g108258 Nematostella vectensis NEMVEDRAFT_v1g108258 I 0.763
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.777
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.784
PHUM474180 Pediculus humanus PHUM474180 I 0.790
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.780
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.789
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.781
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.778
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.783
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.784
scrt Drosophila melanogaster FBgn0004880 D 0.792
SCRT1 Bos taurus ENSBTAG00000046208 I 0.774
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.774
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.774
SCRT1 Homo sapiens ENSG00000261678 D 0.774
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.805
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.774
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.774
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.774
Scrt1 Mus musculus ENSMUSG00000048385 I 0.774
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.774
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.774
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.774
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.805
scrt1a Danio rerio ENSDARG00000100821 I 0.805
scrt1b Danio rerio ENSDARG00000040214 I 0.805
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.805
scrt1b Oryzias latipes ENSORLG00000008641 I 0.807
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.807
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.807
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.793
SCRT2 Callithrix jacchus ENSCJAG00000020870 I 0.764
SCRT2 Cavia porcellus ENSCPOG00000008447 I 0.764
scrt2 Danio rerio ENSDARG00000056175 I 0.786
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I 0.764
SCRT2 Felis catus ENSFCAG00000010922 I 0.764
SCRT2 Homo sapiens ENSG00000215397 D 0.764
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.777
SCRT2 Gallus gallus ENSGALG00000028912 I 0.791
SCRT2 Loxodonta africana ENSLAFG00000030340 I 0.764
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.791
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.779
Scrt2 Mus musculus ENSMUSG00000060257 I 0.764
SCRT2 Otolemur garnettii ENSOGAG00000031187 I 0.764
scrt2 Oryzias latipes ENSORLG00000015072 I 0.788
Scrt2 Rattus norvegicus ENSRNOG00000005148 I 0.764
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.791
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.788
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.788
SCRT2 Tursiops truncatus ENSTTRG00000007039 I 0.764
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.791
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.792
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.792
SMAR010760 Strigamia maritima SMAR010760 I 0.805
Smp_054430 Schistosoma mansoni Smp_054430 I 0.792
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.792
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.792
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.794
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.775
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.787
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.794
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.789
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.787
T265_09545 Opisthorchis viverrini T265_09545 I 0.794
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.773
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.794
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.798
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.792
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.798