ORUFI07G15090 (Oryza rufipogon)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 ORUFI07G15090 T163319_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2WEL1_ORYSA
M10406_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBT_01 		0.991 0.991
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI07G15090.1 CG-1 32 146

Links

Other CG-1 family TFs
Other Oryza rufipogon TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30143.m001171 Ricinus communis 30143.m001171 N
Bo9g176580 Brassica oleracea Bo9g176580 N
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N
Bra009161 Brassica rapa Bra009161 N
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N
Carubv10002921m.g Capsella rubella Carubv10002921m.g N
cassava15468.m1 Manihot esculenta cassava15468.m1 I
cassava34632.m1 Manihot esculenta cassava34632.m1 N
Ca_16122 Cicer arietinum Ca_16122 N
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I
Cla004059 Citrullus lanatus Cla004059 N
Cucsa.165150 Cucumis sativus Cucsa.165150 N
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N
GLYMA02G41710 Glycine max GLYMA02G41710 N
GLYMA14G07260 Glycine max GLYMA14G07260 N
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
LBD33 Arabidopsis thaliana AT5G06080 N
LBD33 Vitis vinifera VIT_13s0019g02060 N
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I
Lus10004707.g Linum usitatissimum Lus10004707.g N
MDP0000133936 Malus domestica MDP0000133936 N
mgf020558m Mimulus guttatus mgf020558m N
MTR_5g080470 Medicago truncatula MTR_5g080470 N
PK00972.1 Cannabis sativa PK00972.1 I
PK23380.1 Cannabis sativa PK23380.1 I
Pm018835 Prunus mume Pm018835 N
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I
TCM_042730 Theobroma cacao TCM_042730 I
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N