MCINX011946 (Melitaea cinxia)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 MCINX011946 T198122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.729 0.729
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.729 0.729
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.729 0.729
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.729 0.729
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.714 0.714
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.714 0.714
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.714 0.714
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.686 0.686
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.686 0.686
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.686 0.686
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.686 0.686
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.679 0.679
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.679 0.679
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.671 0.671
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.621 0.621
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.614 0.614
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.614 0.614
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.614 0.614
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCINX011946-PA GCM 17 157

Links

Other GCM family TFs
Other Melitaea cinxia TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000623 Aedes aegypti AAEL000623 I 0.757
AAEL000631 Aedes aegypti AAEL000631 I 0.721
AALB008012 Anopheles albimanus AALB008012 I 0.750
AALB008013 Anopheles albimanus AALB008013 I 0.786
Aan_R001196 Calypte anna Aan_R001196 I 0.614
Aan_R001550 Calypte anna Aan_R001550 I 0.681
AARA011979 Anopheles arabiensis AARA011979 I 0.714
AARA011980 Anopheles arabiensis AARA011980 I 0.764
AATE008476 Anopheles atroparvus AATE008476 I 0.764
AATE020589 Anopheles atroparvus AATE020589 I 0.743
ACEP23384 Atta cephalotes ACEP23384 I 0.836
ACHR001414 Anopheles christyi ACHR001414 I 0.771
ACHR004082 Anopheles christyi ACHR004082 I 0.714
ACOM031025 Anopheles coluzzii ACOM031025 I 0.736
ACOM031032 Anopheles coluzzii ACOM031032 I 0.714
ACUA009622 Anopheles culicifacies ACUA009622 I 0.779
ACUA018162 Anopheles culicifacies ACUA018162 I 0.714
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.814
ADAC002327 Anopheles darlingi ADAC002327 I 0.786
ADIR000710 Anopheles dirus ADIR000710 I 0.721
ADIR000711 Anopheles dirus ADIR000711 I 0.786
AEPI007160 Anopheles epiroticus AEPI007160 I 0.779
AEPI007161 Anopheles epiroticus AEPI007161 I 0.714
AFAF000663 Anopheles farauti AFAF000663 I 0.714
AFAF005680 Anopheles farauti AFAF005680 I 0.779
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.621
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.671
AFUN009836 Anopheles funestus AFUN009836 I 0.714
AFUN009837 Anopheles funestus AFUN009837 I 0.771
AGAP007782 Anopheles gambiae AGAP007782 I 0.714
AGAP007783 Anopheles gambiae AGAP007783 I 0.771
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.681
AMAM003661 Anopheles maculatus AMAM003661 I 0.771
AMAM005757 Anopheles maculatus AMAM005757 I 0.752
AMEC020313 Anopheles melas AMEC020313 I 0.750
AMEM005966 Anopheles merus AMEM005966 I 0.736
AMEM008520 Anopheles merus AMEM008520 I 0.714
AMIN006367 Anopheles minimus AMIN006367 I 0.714
AMIN006368 Anopheles minimus AMIN006368 I 0.771
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.714
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.771
ASIS002985 Anopheles sinensis ASIS002985 I 0.771
ASIS021139 Anopheles sinensis ASIS021139 I 0.743
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.771
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.721
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.979
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.679
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.614
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.681
CapteG133139 Capitella teleta CapteG133139 I 0.728
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.821
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.707
CLEC013329 Cimex lectularius CLEC013329 I 0.821
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.679
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.729
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.757
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.729
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.757
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.793
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.614
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.661
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.679
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.657
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.681
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.623
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.616
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.696
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.623
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.671
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.679
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.623
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.674
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.674
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.623
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.688
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.696
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.679
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.693
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.703
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.696
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.703
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.696
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.681
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.650
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.696
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.681
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.623
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.681
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.614
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.609
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.681
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.609
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.614
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.679
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.679
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.681
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.686
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.729
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.721
GB45031 Apis mellifera GB45031 I 0.836
gcm Drosophila melanogaster FBgn0014179 D 0.729
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.621
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.647
GCM1 Gallus gallus ENSGALG00000016316 I 0.630
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.609
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.614
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.623
Gcm1 Mus musculus ENSMUSG00000023333 D 0.623
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.654
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.623
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.630
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.664
GCM2 Bos taurus ENSBTAG00000018787 I 0.703
GCM2 Canis familiaris ENSCAFG00000009747 I 0.696
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.696
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.679
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.696
gcm2 Danio rerio ENSDARG00000045413 I 0.679
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.688
GCM2 Equus caballus ENSECAG00000017632 I 0.686
GCM2 Echinops telfairi ENSETEG00000012473 I 0.703
GCM2 Felis catus ENSFCAG00000001608 I 0.686
GCM2 Homo sapiens ENSG00000124827 D 0.696
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.696
GCM2 Gallus gallus ENSGALG00000012768 I 0.664
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.696
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.679
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.674
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.696
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.696
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.696
Gcm2 Mus musculus ENSMUSG00000021362 I 0.681
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.664
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.686
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.679
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.696
gcm2 Oryzias latipes ENSORLG00000019715 I 0.688
GCM2 Procavia capensis ENSPCAG00000011887 I 0.686
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.688
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.650
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.681
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.681
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.679
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.681
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.693
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.696
gcm2 Drosophila melanogaster FBgn0019809 D 0.714
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.664
gcm2.S Xenopus laevis XB-GENE-866131 I 0.674
GD22349 Drosophila simulans FBgn0193756 I 0.693
GE10457 Drosophila yakuba FBgn0228318 I 0.729
GE18856 Drosophila yakuba FBgn0236239 I 0.714
GF21907 Drosophila ananassae FBgn0098907 I 0.736
GF22779 Drosophila ananassae FBgn0099773 I 0.714
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.671
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.614
GG10041 Drosophila erecta FBgn0102353 I 0.714
GG24019 Drosophila erecta FBgn0116158 I 0.729
GH10675 Drosophila grimshawi FBgn0118156 I 0.707
GH11056 Drosophila grimshawi FBgn0118537 I 0.721
GI11073 Drosophila mojavensis FBgn0133835 I 0.721
GI17574 Drosophila mojavensis FBgn0140318 I 0.729
GJ17916 Drosophila virilis FBgn0205084 I 0.721
GJ18313 Drosophila virilis FBgn0205472 I 0.721
GK23810 Drosophila willistoni FBgn0225772 I 0.707
GK23867 Drosophila willistoni FBgn0225829 I 0.686
GL18919 Drosophila persimilis FBgn0156520 I 0.721
GL19218 Drosophila persimilis FBgn0156817 I 0.729
GM12386 Drosophila sechellia FBgn0167323 I 0.729
GM17569 Drosophila sechellia FBgn0172477 I 0.707
gw.285.88.1 Branchiostoma floridae gw.285.88.1 I 0.683
HelroG145480 Helobdella robusta HelroG145480 I 0.629
HHAL003300-PA Halyomorpha halys HHAL003300-PA N 0.667
HMEL005671 Heliconius melpomene HMEL005671 I 0.993
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.829
ISCW022914 Ixodes scapularis ISCW022914 I 0.786
KGM_05743 Danaus plexippus KGM_05743 I 0.957
L798_07938 Zootermopsis nevadensis L798_07938 I 0.800
LCUP008083 Lucilia cuprina LCUP008083 I 0.721
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.807
LotgiG112320 Lottia gigantea LotgiG112320 I 0.657
MDOA003644 Musca domestica MDOA003644 I 0.721
MDOA004732 Musca domestica MDOA004732 I 0.743
NV17454 Nasonia vitripennis NV17454 I 0.821
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.750
PHUM436840 Pediculus humanus PHUM436840 I 0.829
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.814
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.645
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.681
RPRC001299 Rhodnius prolixus RPRC001299 I 0.814
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.643
SINV21711 Solenopsis invicta SINV21711 I 0.836
SMAR010130 Strigamia maritima SMAR010130 I 0.847
SPER_0002793601 Spirometra erinaceieuropaei SPER_0002793601 N 0.611
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.621
Tal_R009935 Tyto alba Tal_R009935 I 0.630
TC014730 Tribolium castaneum TC014730 I 0.807
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.793
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.621
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.814