IRX4 (Anolis carolinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSACAG00000000729 T206649_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.835 0.982
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.912
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.877
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.877
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.877
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.877
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.877
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.877
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000000658 Homeodomain 144 203

Links

Other Homeodomain family TFs
Other Anolis carolinensis TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I
29915.m000479 Ricinus communis 29915.m000479 I
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I
BGIOSGA012571 Oryza indica BGIOSGA012571 I
BGIOSGA017556 Oryza indica BGIOSGA017556 I
BGIOSGA019621 Oryza indica BGIOSGA019621 I
BGIOSGA030535 Oryza indica BGIOSGA030535 I
BGIOSGA034615 Oryza indica BGIOSGA034615 N
BGIOSGA036759 Oryza indica BGIOSGA036759 N
BGIOSGA040489 Oryza indica BGIOSGA040489 I
Bo01002s040 Brassica oleracea Bo01002s040 I
Bo4g012750 Brassica oleracea Bo4g012750 I
Bo6g071110 Brassica oleracea Bo6g071110 I
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I
Bra002421 Brassica rapa Bra002421 I
Bra003239 Brassica rapa Bra003239 I
Bra020196 Brassica rapa Bra020196 I
Bra028918 Brassica rapa Bra028918 I
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I
BRADI2G45480 Brachypodium distachyon BRADI2G45480 I
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I
Carubv10002472m.g Capsella rubella Carubv10002472m.g I
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I
Ca_04100 Cicer arietinum Ca_04100 I
Ca_09495 Cicer arietinum Ca_09495 I
Ca_18932 Cicer arietinum Ca_18932 I
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
Cla007424 Citrullus lanatus Cla007424 I
Cla018337 Citrullus lanatus Cla018337 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
F775_07376 Aegilops tauschii F775_07376 I
F775_28648 Aegilops tauschii F775_28648 N
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I
GLYMA03G00460 Glycine max GLYMA03G00460 I
GLYMA04G40121 Glycine max GLYMA04G40121 I
GLYMA04G40130 Glycine max GLYMA04G40130 I
GLYMA06G14720 Glycine max GLYMA06G14720 I
GLYMA09G41050 Glycine max GLYMA09G41050 I
GLYMA13G34240 Glycine max GLYMA13G34240 I
GLYMA13G34251 Glycine max GLYMA13G34251 I
GLYMA13G34261 Glycine max GLYMA13G34261 I
GLYMA13G34281 Glycine max GLYMA13G34281 I
GLYMA14G36430 Glycine max GLYMA14G36430 I
GLYMA16G34590 Glycine max GLYMA16G34590 I
GLYMA18G44560 Glycine max GLYMA18G44560 I
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I
GRMZM2G025895 Zea mays GRMZM2G025895 I
GRMZM2G061408 Zea mays GRMZM2G061408 I
GRMZM2G163418 Zea mays GRMZM2G163418 I
GRMZM2G324999 Zea mays GRMZM2G324999 I
GRMZM2G411766 Zea mays GRMZM2G411766 I
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I
LPERR03G14340 Leersia perrieri LPERR03G14340 I
LPERR05G06630 Leersia perrieri LPERR05G06630 I
LPERR05G09130 Leersia perrieri LPERR05G09130 I
LPERR08G11030 Leersia perrieri LPERR08G11030 I
LPERR09G04330 Leersia perrieri LPERR09G04330 I
LPERR11G00950 Leersia perrieri LPERR11G00950 N
LPERR12G01060 Leersia perrieri LPERR12G01060 N
Lus10012870.g Linum usitatissimum Lus10012870.g I
Lus10025216.g Linum usitatissimum Lus10025216.g I
Lus10029021.g Linum usitatissimum Lus10029021.g I
Lus10030517.g Linum usitatissimum Lus10030517.g I
Lus10034244.g Linum usitatissimum Lus10034244.g I
MDP0000754989 Malus domestica MDP0000754989 I
mgf009193m Mimulus guttatus mgf009193m I
MLOC_34522 Hordeum vulgare MLOC_34522 N
MLOC_66134 Hordeum vulgare MLOC_66134 I
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I
MTR_2g075610 Medicago truncatula MTR_2g075610 I
MTR_2g075680 Medicago truncatula MTR_2g075680 I
MTR_2g075690 Medicago truncatula MTR_2g075690 I
MTR_2g075700 Medicago truncatula MTR_2g075700 I
MTR_2g075750 Medicago truncatula MTR_2g075750 I
MTR_5g067700 Medicago truncatula MTR_5g067700 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
MTR_7g073430 Medicago truncatula MTR_7g073430 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
MTR_8g032510 Medicago truncatula MTR_8g032510 N
OB05G17240 Oryza brachyantha OB05G17240 I
OB11G10740 Oryza brachyantha OB11G10740 N
OB12G11010 Oryza brachyantha OB12G11010 N
OBART03G16400 Oryza barthii OBART03G16400 I
OBART05G08130 Oryza barthii OBART05G08130 I
OBART05G11710 Oryza barthii OBART05G11710 I
OBART09G06020 Oryza barthii OBART09G06020 I
OBART11G01090 Oryza barthii OBART11G01090 N
OBART12G00820 Oryza barthii OBART12G00820 N
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N
OLONG_019907 Oryza longistaminata OLONG_019907 I
OLONG_024544 Oryza longistaminata OLONG_024544 I
OMERI03G14670 Oryza meridionalis OMERI03G14670 I
OMERI05G10380 Oryza meridionalis OMERI05G10380 I
OMERI08G11390 Oryza meridionalis OMERI08G11390 I
OMERI09G04750 Oryza meridionalis OMERI09G04750 I
ONIVA03G17390 Oryza nivara ONIVA03G17390 I
ONIVA05G08650 Oryza nivara ONIVA05G08650 I
ONIVA05G12100 Oryza nivara ONIVA05G12100 I
ONIVA08G13920 Oryza nivara ONIVA08G13920 I
ONIVA09G05410 Oryza nivara ONIVA09G05410 I
ONIVA11G01030 Oryza nivara ONIVA11G01030 N
OPUNC05G07410 Oryza punctata OPUNC05G07410 I
OPUNC05G10020 Oryza punctata OPUNC05G10020 I
OPUNC11G00940 Oryza punctata OPUNC11G00940 N
OPUNC12G00960 Oryza punctata OPUNC12G00960 N
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N
OS03G0335200 Oryza sativa OS03G0335200 I
OS05G0322900 Oryza sativa OS05G0322900 I
OS08G0386200 Oryza sativa OS08G0386200 I
OS09G0334500 Oryza sativa OS09G0334500 I
OS11G0116900 Oryza sativa OS11G0116900 N
OS12G0116400 Oryza sativa OS12G0116400 N
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I
Pavir.J05812 Panicum virgatum Pavir.J05812 I
Pavir.J31578 Panicum virgatum Pavir.J31578 N
Pavir.J37854 Panicum virgatum Pavir.J37854 I
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I
PK03324.1 Cannabis sativa PK03324.1 I
PK10616.1 Cannabis sativa PK10616.1 I
PK21378.1 Cannabis sativa PK21378.1 I
Pm003013 Prunus mume Pm003013 I
Pm003014 Prunus mume Pm003014 I
Pm003015 Prunus mume Pm003015 I
Pm019286 Prunus mume Pm019286 I
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I
Sb01g036180 Sorghum bicolor Sb01g036180 I
Sb02g022280 Sorghum bicolor Sb02g022280 I
Sb02g022290 Sorghum bicolor Sb02g022290 I
Sb08g002590 Sorghum bicolor Sb08g002590 N
Sb08g005080 Sorghum bicolor Sb08g005080 I
Si011007m.g Setaria italica Si011007m.g N
Si015433m.g Setaria italica Si015433m.g I
Si022702m.g Setaria italica Si022702m.g I
Si025181m.g Setaria italica Si025181m.g I
Si026831m.g Setaria italica Si026831m.g N
Si030528m.g Setaria italica Si030528m.g I
Si030531m.g Setaria italica Si030531m.g I
Si036565m.g Setaria italica Si036565m.g I
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I
TCM_006103 Theobroma cacao TCM_006103 I
TCM_019689 Theobroma cacao TCM_019689 I
TCM_045556 Theobroma cacao TCM_045556 I
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N
TRIUR3_14306 Triticum urartu TRIUR3_14306 I
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I
WRKY38 Arabidopsis thaliana AT5G22570 D
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY70 Arabidopsis thaliana AT3G56400 D
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I