CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAPLG00000009168
(
Anas platyrhynchos
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSAPLG00000009168
T207307_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irx2
M00386_2.00
Mus musculus
NNDACAHNN
NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.866
0.982
Irx5
M00455_2.00
Mus musculus
NNNDACAHN
NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.866
0.982
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.866
0.982
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.866
0.982
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.866
0.982
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.866
0.982
ara
M06518_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.814
0.912
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN
NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.814
0.912
ara
M06314_2.00
Drosophila melanogaster
DWWACA
TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.814
0.912
caup
M06519_2.00
Drosophila melanogaster
WAACA
TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.806
0.877
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA
TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.806
0.877
caup
M06316_2.00
Drosophila melanogaster
NDDACA
TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.806
0.877
Irx4
M00416_2.00
Mus musculus
NNNDAMAH
DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.781
0.895
Irx6
M00456_2.00
Mus musculus
NNDAHWN
NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.780
0.860
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAPLP00000008866
Homeodomain
108
167
PAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Anas platyrhynchos
TFs
379 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011380
Aedes aegypti
AAEL011380
N
AAH44009
Xenopus laevis
AAH44009
N
AALB006743
Anopheles albimanus
AALB006743
N
AARA010318
Anopheles arabiensis
AARA010318
N
AATE010886
Anopheles atroparvus
AATE010886
N
AATE018776
Anopheles atroparvus
AATE018776
N
AC127605.1
Rattus norvegicus
ENSRNOG00000033156
N
ACEP16613
Atta cephalotes
ACEP16613
N
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
ACUA021022
Anopheles culicifacies
ACUA021022
N
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
ADAC001494
Anopheles darlingi
ADAC001494
N
ADIR000367
Anopheles dirus
ADIR000367
N
ADIR011701
Anopheles dirus
ADIR011701
N
AEPI002924
Anopheles epiroticus
AEPI002924
N
AFAF003948
Anopheles farauti
AFAF003948
N
AFUN010134
Anopheles funestus
AFUN010134
N
AGAP000005
Anopheles gambiae
AGAP000005
N
AMAM015540
Anopheles maculatus
AMAM015540
N
AMEC021909
Anopheles melas
AMEC021909
N
AMEM017336
Anopheles merus
AMEM017336
N
AMIN005344
Anopheles minimus
AMIN005344
N
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
ASIS000124
Anopheles sinensis
ASIS000124
N
ASIS009950
Anopheles sinensis
ASIS009950
N
ASU_03902
Ascaris suum
ASU_03902
N
A_00070
Schistosoma haematobium
A_00070
N
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
Bm4180
Brugia malayi
Bm4180
N
CapteG158220
Capitella teleta
CapteG158220
N
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
csin112095
Clonorchis sinensis
csin112095
N
D915_00818
Fasciola hepatica
D915_00818
N
D917_01254
Trichinella nativa
D917_01254
N
D918_07195
Trichuris suis
D918_07195
N
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
Dsp1
Drosophila melanogaster
FBgn0011764
N
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
ECANG7_07075
Echinococcus canadensis
ECANG7_07075
N
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
EFV57410
Trichinella spiralis
EFV57410
N
EmuJ_000941400
Echinococcus multilocularis
EmuJ_000941400
N
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
ENSOGAG00000006589
Otolemur garnettii
ENSOGAG00000006589
N
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
ENSPFOG00000004533
Poecilia formosa
ENSPFOG00000004533
N
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
GA11488
Drosophila pseudoobscura
FBgn0071539
N
GD17278
Drosophila simulans
FBgn0188840
N
GE17263
Drosophila yakuba
FBgn0234741
N
GF19115
Drosophila ananassae
FBgn0096126
N
GG17955
Drosophila erecta
FBgn0110175
N
GH12282
Drosophila grimshawi
FBgn0119761
N
GI10980
Drosophila mojavensis
FBgn0133743
N
GJ19445
Drosophila virilis
FBgn0206588
N
GK25058
Drosophila willistoni
FBgn0227017
N
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
HCOI00860100
Haemonchus contortus
HCOI00860100
N
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
HelroG157878
Helobdella robusta
HelroG157878
N
HMEL007340
Heliconius melpomene
HMEL007340
N
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
hmgb1a
Danio rerio
ENSDARG00000099175
N
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
HMGB2
Sus scrofa
ENSSSCG00000009704
N
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
hmgb2a
Danio rerio
ENSDARG00000029722
N
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
hmgb3b
Danio rerio
ENSDARG00000006408
N
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
HmN_000761000
Hymenolepis microstoma
HmN_000761000
N
HNAJ_0000227501
Hymenolepis nana
HNAJ_0000227501
N
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
ISCW017350
Ixodes scapularis
ISCW017350
N
L596_g22130
Steinernema carpocapsae
L596_g22130
N
L889_g13533
Steinernema feltiae
L889_g13533
N
L892_g17551
Steinernema scapterisci
L892_g17551
N
L893_g5947
Steinernema glaseri
L893_g5947
N
LCUP007363
Lucilia cuprina
LCUP007363
N
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
LOAG_04936
Loa loa
LOAG_04936
N
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
LotgiG200052
Lottia gigantea
LotgiG200052
N
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
MDOA008812
Musca domestica
MDOA008812
N
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
Myotis_brandtii_HMGB3_10026974
Myotis brandtii
Myotis_brandtii_HMGB3_10026974
N
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
NECAME_09126
Necator americanus
NECAME_09126
N
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
NV15664
Nasonia vitripennis
NV15664
N
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
PHUM006290
Pediculus humanus
PHUM006290
N
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
RPRC006379
Rhodnius prolixus
RPRC006379
N
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
SINV22586
Solenopsis invicta
SINV22586
N
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
SMAR013695
Strigamia maritima
SMAR013695
N
Smp_000980
Schistosoma mansoni
Smp_000980
N
Smp_100090
Schistosoma mansoni
Smp_100090
N
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
SMU15002907
Schmidtea mediterranea
SMU15002907
N
SMU15013231
Schmidtea mediterranea
SMU15013231
N
SMU15016767
Schmidtea mediterranea
SMU15016767
N
SMU15024564
Schmidtea mediterranea
SMU15024564
N
SMU15027649
Schmidtea mediterranea
SMU15027649
N
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
T265_10726
Opisthorchis viverrini
T265_10726
N
T265_12733
Opisthorchis viverrini
T265_12733
N
TASK_0000795701
Taenia asiatica
TASK_0000795701
N
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
tetur02g08260
Tetranychus urticae
tetur02g08260
N
tetur02g08340
Tetranychus urticae
tetur02g08340
N
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
TsM_000115400
Taenia solium
TsM_000115400
N
TsM_000746700
Taenia solium
TsM_000746700
N
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
TTAC_0000939701
Hydatigera taeniaeformis
TTAC_0000939701
N
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
YQE_03203
Dendroctonus ponderosae
YQE_03203
N