cassava8711.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava8711.m1 T257247_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8711.m1 MADS box 15 62

Links

Other MADS box family TFs
Other Manihot esculenta TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28152.m000914 Ricinus communis 28152.m000914 N 0.000
30170.m013749 Ricinus communis 30170.m013749 N 0.000
Al_scaffold_0797_1 Arabidopsis lyrata Al_scaffold_0797_1 N 0.000
AMTR_s00164p00062120 Amborella trichopoda AMTR_s00164p00062120 N 0.000
Aquca_017_00066 Aquilegia coerulea Aquca_017_00066 N 0.000
Aquca_042_00162 Aquilegia coerulea Aquca_042_00162 N 0.000
Aquca_042_00163 Aquilegia coerulea Aquca_042_00163 N 0.000
AT2G14760 Arabidopsis thaliana AT2G14760 N 0.000
BGIOSGA010239 Oryza indica BGIOSGA010239 N 0.000
BGIOSGA011251 Oryza indica BGIOSGA011251 N 0.000
BGIOSGA023988 Oryza indica BGIOSGA023988 N 0.000
BGIOSGA035917 Oryza indica BGIOSGA035917 N 0.000
BHLH139 Arabidopsis thaliana AT5G43175 N 0.000
BHLH54 Arabidopsis thaliana AT1G27740 N 0.000
BHLH85 Arabidopsis thaliana AT4G33880 N 0.000
Bo1g007780 Brassica oleracea Bo1g007780 N 0.000
Bo3g142890 Brassica oleracea Bo3g142890 N 0.000
Bo3g169400 Brassica oleracea Bo3g169400 N 0.000
Bo5g052310 Brassica oleracea Bo5g052310 N 0.000
Bo7g048630 Brassica oleracea Bo7g048630 N 0.000
Bo7g116460 Brassica oleracea Bo7g116460 N 0.000
Bostr.15697s0100 Boechera stricta Bostr.15697s0100 N 0.000
Bostr.2199s0029 Boechera stricta Bostr.2199s0029 N 0.000
Bostr.3148s0158 Boechera stricta Bostr.3148s0158 N 0.000
Bostr.7867s1234 Boechera stricta Bostr.7867s1234 N 0.000
Bra010921 Brassica rapa Bra010921 N 0.000
Bra011476 Brassica rapa Bra011476 N 0.000
Bra030063 Brassica rapa Bra030063 N 0.000
Bra032846 Brassica rapa Bra032846 N 0.000
Bra034587 Brassica rapa Bra034587 N 0.000
Bra036969 Brassica rapa Bra036969 N 0.000
BRADI1G14600 Brachypodium distachyon BRADI1G14600 N 0.000
BRADI1G22960 Brachypodium distachyon BRADI1G22960 N 0.000
BRADI1G70860 Brachypodium distachyon BRADI1G70860 N 0.000
BRADI4G03070 Brachypodium distachyon BRADI4G03070 N 0.000
Cagra.1103s0007 Capsella grandiflora Cagra.1103s0007 N 0.000
Cagra.1305s0010 Capsella grandiflora Cagra.1305s0010 N 0.000
Cagra.1822s0081 Capsella grandiflora Cagra.1822s0081 N 0.000
Cagra.9228s0001 Capsella grandiflora Cagra.9228s0001 N 0.000
Carubv10006623m.g Capsella rubella Carubv10006623m.g N 0.000
Carubv10011072m.g Capsella rubella Carubv10011072m.g N 0.000
Carubv10015484m.g Capsella rubella Carubv10015484m.g N 0.000
Carubv10028625m.g Capsella rubella Carubv10028625m.g N 0.000
cassava14986.m1 Manihot esculenta cassava14986.m1 N 0.000
cassava20440.m1 Manihot esculenta cassava20440.m1 N 0.000
cassava25589.m1 Manihot esculenta cassava25589.m1 N 0.000
cassava38950.m1 Manihot esculenta cassava38950.m1 N 0.000
Ca_01588 Cicer arietinum Ca_01588 N 0.000
Ca_05644 Cicer arietinum Ca_05644 N 0.000
Ca_11909 Cicer arietinum Ca_11909 N 0.000
Ca_18366 Cicer arietinum Ca_18366 N 0.000
chr1.CM0088.610.nd Lotus japonicus chr1.CM0088.610.nd N 0.000
chr5.CM0096.500.nd Lotus japonicus chr5.CM0096.500.nd N 0.000
chr5.CM0200.480.nc Lotus japonicus chr5.CM0200.480.nc N 0.000
Ciclev10003450m.g Citrus clementina Ciclev10003450m.g N 0.000
Ciclev10030309m.g Citrus clementina Ciclev10030309m.g N 0.000
Cla016346 Citrullus lanatus Cla016346 N 0.000
Cla020918 Citrullus lanatus Cla020918 N 0.000
Cla022968 Citrullus lanatus Cla022968 N 0.000
Cucsa.219180 Cucumis sativus Cucsa.219180 N 0.000
Cucsa.352750 Cucumis sativus Cucsa.352750 N 0.000
Eucgr.F02259 Eucalyptus grandis Eucgr.F02259 N 0.000
Eucgr.G01234 Eucalyptus grandis Eucgr.G01234 N 0.000
Eucgr.I01069 Eucalyptus grandis Eucgr.I01069 N 0.000
evm.TU.supercontig_106.57 Carica papaya evm.TU.supercontig_106.57 N 0.000
evm.TU.supercontig_142.14 Carica papaya evm.TU.supercontig_142.14 N 0.000
F775_02582 Aegilops tauschii F775_02582 N 0.000
F775_02706 Aegilops tauschii F775_02706 N 0.000
F775_27628 Aegilops tauschii F775_27628 N 0.000
fgenesh2_kg.3__3067__AT2G14760.1 Arabidopsis lyrata fgenesh2_kg.3__3067__AT2G14760.1 N 0.000
fgenesh2_kg.8__503__AT5G43175.1 Arabidopsis lyrata fgenesh2_kg.8__503__AT5G43175.1 N 0.000
gene02560-v1.0-hybrid Fragaria vesca gene02560-v1.0-hybrid N 0.000
gene25555-v1.0-hybrid Fragaria vesca gene25555-v1.0-hybrid N 0.000
GLYMA04G04801 Glycine max GLYMA04G04801 N 0.000
GLYMA10G40350 Glycine max GLYMA10G40350 N 0.000
GLYMA10G40360 Glycine max GLYMA10G40360 N 0.000
GLYMA14G09781 Glycine max GLYMA14G09781 N 0.000
GLYMA17G35423 Glycine max GLYMA17G35423 N 0.000
GLYMA20G26980 Glycine max GLYMA20G26980 N 0.000
GLYMA20G26991 Glycine max GLYMA20G26991 N 0.000
Gorai.005G231900 Gossypium raimondii Gorai.005G231900 N 0.000
Gorai.009G219100 Gossypium raimondii Gorai.009G219100 N 0.000
Gorai.010G025400 Gossypium raimondii Gorai.010G025400 N 0.000
GRMZM2G057260 Zea mays GRMZM2G057260 N 0.000
GRMZM2G383841 Zea mays GRMZM2G383841 N 0.000
GRMZM2G395549 Zea mays GRMZM2G395549 N 0.000
GSMUA_Achr2G17130_001 Musa acuminata GSMUA_Achr2G17130_001 N 0.000
GSMUA_Achr3G18870_001 Musa acuminata GSMUA_Achr3G18870_001 N 0.000
GSMUA_Achr4G23240_001 Musa acuminata GSMUA_Achr4G23240_001 N 0.000
GSMUA_Achr6G07760_001 Musa acuminata GSMUA_Achr6G07760_001 N 0.000
GSMUA_Achr6G16890_001 Musa acuminata GSMUA_Achr6G16890_001 N 0.000
GSMUA_Achr9G09600_001 Musa acuminata GSMUA_Achr9G09600_001 N 0.000
GSMUA_AchrUn_randomG07080_001 Musa acuminata GSMUA_AchrUn_randomG07080_001 N 0.000
LPERR03G21650 Leersia perrieri LPERR03G21650 N 0.000
LPERR07G17840 Leersia perrieri LPERR07G17840 N 0.000
LPERR11G16970 Leersia perrieri LPERR11G16970 N 0.000
LPERR12G11190 Leersia perrieri LPERR12G11190 N 0.000
LPERR12G14550 Leersia perrieri LPERR12G14550 N 0.000
Lus10001068.g Linum usitatissimum Lus10001068.g N 0.000
Lus10004315.g Linum usitatissimum Lus10004315.g N 0.000
MDP0000131874 Malus domestica MDP0000131874 N 0.000
MDP0000145825 Malus domestica MDP0000145825 N 0.000
MDP0000198037 Malus domestica MDP0000198037 N 0.000
MDP0000573178 Malus domestica MDP0000573178 N 0.000
MDP0000946515 Malus domestica MDP0000946515 N 0.000
mgf018282m Mimulus guttatus mgf018282m N 0.000
mgf019332m Mimulus guttatus mgf019332m N 0.000
mgf022238m Mimulus guttatus mgf022238m N 0.000
mgf024863m Mimulus guttatus mgf024863m N 0.000
MLOC_60270 Hordeum vulgare MLOC_60270 N 0.000
MLOC_67369 Hordeum vulgare MLOC_67369 N 0.000
MLOC_74022 Hordeum vulgare MLOC_74022 N 0.000
MLOC_76486 Hordeum vulgare MLOC_76486 N 0.000
MTR_1g018090 Medicago truncatula MTR_1g018090 N 0.000
MTR_1g106460 Medicago truncatula MTR_1g106460 N 0.000
MTR_1g106480 Medicago truncatula MTR_1g106480 N 0.000
MTR_3g103030 Medicago truncatula MTR_3g103030 N 0.000
MTR_5g005110 Medicago truncatula MTR_5g005110 N 0.000
OB03G17860 Oryza brachyantha OB03G17860 N 0.000
OB03G34210 Oryza brachyantha OB03G34210 N 0.000
OB07G26210 Oryza brachyantha OB07G26210 N 0.000
OB12G24200 Oryza brachyantha OB12G24200 N 0.000
OBART03G07520 Oryza barthii OBART03G07520 N 0.000
OBART03G26170 Oryza barthii OBART03G26170 N 0.000
OBART12G17400 Oryza barthii OBART12G17400 N 0.000
OGLUM03G07680 Oryza glumaepatula OGLUM03G07680 N 0.000
OGLUM03G27050 Oryza glumaepatula OGLUM03G27050 N 0.000
OGLUM07G20330 Oryza glumaepatula OGLUM07G20330 N 0.000
OGLUM09G03740 Oryza glumaepatula OGLUM09G03740 N 0.000
OLONG_006157 Oryza longistaminata OLONG_006157 N 0.000
OLONG_008046 Oryza longistaminata OLONG_008046 N 0.000
OLONG_010636 Oryza longistaminata OLONG_010636 N 0.000
OLONG_014997 Oryza longistaminata OLONG_014997 N 0.000
OMERI03G07360 Oryza meridionalis OMERI03G07360 N 0.000
OMERI03G23570 Oryza meridionalis OMERI03G23570 N 0.000
OMERI07G17220 Oryza meridionalis OMERI07G17220 N 0.000
OMERI12G12030 Oryza meridionalis OMERI12G12030 N 0.000
ONIVA03G07980 Oryza nivara ONIVA03G07980 N 0.000
ONIVA03G27180 Oryza nivara ONIVA03G27180 N 0.000
ONIVA07G18960 Oryza nivara ONIVA07G18960 N 0.000
ONIVA12G13790 Oryza nivara ONIVA12G13790 N 0.000
ONIVA12G15960 Oryza nivara ONIVA12G15960 N 0.000
OPUNC03G07300 Oryza punctata OPUNC03G07300 N 0.000
OPUNC03G23870 Oryza punctata OPUNC03G23870 N 0.000
OPUNC07G19390 Oryza punctata OPUNC07G19390 N 0.000
OPUNC12G15720 Oryza punctata OPUNC12G15720 N 0.000
orange1.1g036928m.g Citrus sinensis orange1.1g036928m.g N 0.000
orange1.1g047654m.g Citrus sinensis orange1.1g047654m.g N 0.000
ORGLA03G0073500 Oryza glaberrima ORGLA03G0073500 N 0.000
ORGLA03G0242600 Oryza glaberrima ORGLA03G0242600 N 0.000
ORGLA12G0149000 Oryza glaberrima ORGLA12G0149000 N 0.000
ORUFI03G07580 Oryza rufipogon ORUFI03G07580 N 0.000
ORUFI03G27070 Oryza rufipogon ORUFI03G27070 N 0.000
ORUFI07G21430 Oryza rufipogon ORUFI07G21430 N 0.000
ORUFI12G19280 Oryza rufipogon ORUFI12G19280 N 0.000
OS03G0205300 Oryza sativa OS03G0205300 N 0.000
OS07G0588400 Oryza sativa OS07G0588400 N 0.000
OS12G0589000 Oryza sativa OS12G0589000 N 0.000
Pavir.Ba01059 Panicum virgatum Pavir.Ba01059 N 0.000
Pavir.Bb01173 Panicum virgatum Pavir.Bb01173 N 0.000
Pavir.Ia00352 Panicum virgatum Pavir.Ia00352 N 0.000
Pavir.Ia04640 Panicum virgatum Pavir.Ia04640 N 0.000
Pavir.Ib00696 Panicum virgatum Pavir.Ib00696 N 0.000
Pavir.J00626 Panicum virgatum Pavir.J00626 N 0.000
PGSC0003DMG400021526 Solanum tuberosum PGSC0003DMG400021526 N 0.000
PGSC0003DMG400036714 Solanum tuberosum PGSC0003DMG400036714 N 0.000
PGSC0003DMG400039299 Solanum tuberosum PGSC0003DMG400039299 N 0.000
PK01802.1 Cannabis sativa PK01802.1 N 0.000
Pm005392 Prunus mume Pm005392 N 0.000
Pm021172 Prunus mume Pm021172 N 0.000
POPTR_0001s30150 Populus trichocarpa POPTR_0001s30150 N 0.000
POPTR_0002s12000 Populus trichocarpa POPTR_0002s12000 N 0.000
POPTR_0009s09210 Populus trichocarpa POPTR_0009s09210 N 0.000
POPTR_0014s01730 Populus trichocarpa POPTR_0014s01730 N 0.000
PRUPE_ppa015160mg Prunus persica PRUPE_ppa015160mg N 0.000
RSL2 Arabidopsis lyrata fgenesh2_kg.7__724__AT4G33880.1 N 0.000
RSL4 Arabidopsis lyrata fgenesh2_kg.1__2933__AT1G27740.1 N 0.000
SapurV1A.0005s0400 Salix purpurea SapurV1A.0005s0400 N 0.000
SapurV1A.0019s0320 Salix purpurea SapurV1A.0019s0320 N 0.000
SapurV1A.0476s0200 Salix purpurea SapurV1A.0476s0200 N 0.000
SapurV1A.0845s0110 Salix purpurea SapurV1A.0845s0110 N 0.000
SapurV1A.2301s0020 Salix purpurea SapurV1A.2301s0020 N 0.000
Sb01g007160 Sorghum bicolor Sb01g007160 N 0.000
Sb02g037990 Sorghum bicolor Sb02g037990 N 0.000
Sb05g025230 Sorghum bicolor Sb05g025230 N 0.000
SELMODRAFT_404767 Selaginella moellendorffii SELMODRAFT_404767 N 0.000
SELMODRAFT_419388 Selaginella moellendorffii SELMODRAFT_419388 N 0.000
Si032445m.g Setaria italica Si032445m.g N 0.000
Si039720m.g Setaria italica Si039720m.g N 0.000
Solyc01g107140.1 Solanum lycopersicum Solyc01g107140.1 N 0.000
Solyc04g077960.1 Solanum lycopersicum Solyc04g077960.1 N 0.000
TCM_007220 Theobroma cacao TCM_007220 N 0.000
TCM_034717 Theobroma cacao TCM_034717 N 0.000
Thhalv10003393m.g Eutrema salsugineum Thhalv10003393m.g N 0.000
Thhalv10009862m.g Eutrema salsugineum Thhalv10009862m.g N 0.000
Thhalv10026786m.g Eutrema salsugineum Thhalv10026786m.g N 0.000
Traes_2AS_9A3F73BE3 Triticum aestivum Traes_2AS_9A3F73BE3 N 0.000
Traes_2BS_659F9ABB9 Triticum aestivum Traes_2BS_659F9ABB9 N 0.000
Traes_2DS_7C9C33E09 Triticum aestivum Traes_2DS_7C9C33E09 N 0.000
Traes_4AL_6A6EC9A6A Triticum aestivum Traes_4AL_6A6EC9A6A N 0.000
Traes_4AS_7530AAEB4 Triticum aestivum Traes_4AS_7530AAEB4 N 0.000
Traes_4BS_9BFCC52AD Triticum aestivum Traes_4BS_9BFCC52AD N 0.000
Traes_4DL_61AE80723 Triticum aestivum Traes_4DL_61AE80723 N 0.000
Traes_4DS_7488F4608 Triticum aestivum Traes_4DS_7488F4608 N 0.000
Traes_5AS_5B9D5E067 Triticum aestivum Traes_5AS_5B9D5E067 N 0.000
Traes_5BL_E1D1D198E Triticum aestivum Traes_5BL_E1D1D198E N 0.000
Traes_5BS_0F8DBB33D Triticum aestivum Traes_5BS_0F8DBB33D N 0.000
Traes_5DS_51467BEB4 Triticum aestivum Traes_5DS_51467BEB4 N 0.000
TRIUR3_01454 Triticum urartu TRIUR3_01454 N 0.000
TRIUR3_17670 Triticum urartu TRIUR3_17670 N 0.000
TRIUR3_24341 Triticum urartu TRIUR3_24341 N 0.000
VIT_03s0091g00730 Vitis vinifera VIT_03s0091g00730 N 0.000
VIT_18s0001g09210 Vitis vinifera VIT_18s0001g09210 N 0.000