Bo2g136280 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo2g136280 T292335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.970 0.991
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g136280.1 NAC/NAM 54 179

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29703.m001533 Ricinus communis 29703.m001533 N
Bo4g098290 Brassica oleracea Bo4g098290 N
Bo8g098350 Brassica oleracea Bo8g098350 N
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N
Bra007723 Brassica rapa Bra007723 N
Bra040421 Brassica rapa Bra040421 N
Carubv10018085m.g Capsella rubella Carubv10018085m.g N
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N
chr5.CM0909.10.nc Lotus japonicus chr5.CM0909.10.nc N
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N
GLYMA02G16930 Glycine max GLYMA02G16930 N
GLYMA10G02860 Glycine max GLYMA10G02860 N
Lus10008176.g Linum usitatissimum Lus10008176.g N
Lus10027980.g Linum usitatissimum Lus10027980.g N
Lus10029631.g Linum usitatissimum Lus10029631.g N
Lus10042674.g Linum usitatissimum Lus10042674.g N
MBD1 Arabidopsis lyrata scaffold_702078.1 N
MBD1 Arabidopsis thaliana AT4G22745 N
MBD4 Arabidopsis thaliana AT3G63030 N
MBD4 Arabidopsis lyrata scaffold_503585.1 N
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N