Lus10042674.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10042674.g T261551_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10042674 MBD 62 135

Links

Other MBD family TFs
Other Linum usitatissimum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.986
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.824
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.811
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.797
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.797
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.797
29703.m001533 Ricinus communis 29703.m001533 N 0.784
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.784
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.784
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.757
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.757
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.743
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.743
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.743
Bo4g098290 Brassica oleracea Bo4g098290 N 0.726
Bra040421 Brassica rapa Bra040421 N 0.726
MBD4 Arabidopsis thaliana AT3G63030 N 0.716
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.716
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.716
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.712
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.712
Bo8g098350 Brassica oleracea Bo8g098350 N 0.703
Bra007723 Brassica rapa Bra007723 N 0.703
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.703
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.703