Lus10029631.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10029631.g T261546_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10029631 MBD 62 135

Links

Other MBD family TFs
Other Linum usitatissimum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.986
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.838
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.824
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.811
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.811
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.811
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.797
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.797
29703.m001533 Ricinus communis 29703.m001533 N 0.797
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.770
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.770
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.757
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.757
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.730
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.730
MBD4 Arabidopsis thaliana AT3G63030 N 0.730
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.716
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.716
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.703
MBD1 Arabidopsis thaliana AT4G22745 N 0.703
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.703
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.703
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.703
Bra040421 Brassica rapa Bra040421 N 0.703
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.703
Bo4g098290 Brassica oleracea Bo4g098290 N 0.703