ANAC039 (Arabidopsis lyrata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 fgenesh1_pg.C_scaffold_4000352 T292930_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.974 0.991
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.974 0.991
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.900 0.781
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.900 0.781
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.900 0.781
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.879 0.754
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.879 0.754
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.879 0.754
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.876 0.763
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.873 0.763
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_4000352 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Arabidopsis lyrata TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29872.m000537 Ricinus communis 29872.m000537 N
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N
BGIOSGA025964 Oryza indica BGIOSGA025964 N
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N
Carubv10004949m.g Capsella rubella Carubv10004949m.g N
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N
Ca_11130 Cicer arietinum Ca_11130 N
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N
Cla005525 Citrullus lanatus Cla005525 N
Cucsa.180010 Cucumis sativus Cucsa.180010 N
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N
GLYMA12G02530 Glycine max GLYMA12G02530 N
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N
GRMZM2G131516 Zea mays GRMZM2G131516 N
LPERR07G16410 Leersia perrieri LPERR07G16410 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
MDP0000269044 Malus domestica MDP0000269044 N
MDP0000287321 Malus domestica MDP0000287321 N
MDP0000289554 Malus domestica MDP0000289554 N
MLOC_62589 Hordeum vulgare MLOC_62589 N
MTR_4g076020 Medicago truncatula MTR_4g076020 N
OBART07G19080 Oryza barthii OBART07G19080 N
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N
OMERI07G15800 Oryza meridionalis OMERI07G15800 N
ONIVA07G17430 Oryza nivara ONIVA07G17430 N
OPUNC07G17970 Oryza punctata OPUNC07G17970 N
OPUNC07G18000 Oryza punctata OPUNC07G18000 N
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N
OS07G0567700 Oryza sativa OS07G0567700 N
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N
PK21090.1 Cannabis sativa PK21090.1 N
Pm014866 Prunus mume Pm014866 N
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N
SCL23 Arabidopsis thaliana AT5G41920 N
Si032551m.g Setaria italica Si032551m.g N
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N
TCM_002021 Theobroma cacao TCM_002021 N
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N