CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400026332
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400026332
T295158_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400067707
NAC/NAM
6
136
SPGFRFYPTEEELISFYLHKKLEGKRPELDRVIPVVTIYDFDPWHLPKFHGELCMGDTEQWFFFVPRQEREARGGRPCRTTNCGYWKATGSPSYVYSSNSKVIGVKKSMVFYKGKAPTGKKTKWKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL105
Arabidopsis thaliana
AT5G37415
I
AGL43
Arabidopsis thaliana
AT5G40220
I
AGL51
Arabidopsis thaliana
AT4G02235
I
AGL52
Arabidopsis thaliana
AT4G11250
I
AGL75
Arabidopsis thaliana
AT5G41200
I
AGL76
Arabidopsis thaliana
AT5G40120
I
AGL77
Arabidopsis thaliana
AT5G38740
I
AGL78
Arabidopsis thaliana
AT5G65330
D
AGL81
Arabidopsis thaliana
AT5G39750
I
AGL89
Arabidopsis thaliana
AT5G27580
N
AGL98
Arabidopsis thaliana
AT5G39810
I
AT5G26865
Arabidopsis thaliana
AT5G26865
N
Bo00615s090
Brassica oleracea
Bo00615s090
I
Bo4g139260
Brassica oleracea
Bo4g139260
I
Bo4g139560
Brassica oleracea
Bo4g139560
N
Bo4g139620
Brassica oleracea
Bo4g139620
N
Bo4g139640
Brassica oleracea
Bo4g139640
N
Bostr.0568s0255
Boechera stricta
Bostr.0568s0255
I
Bostr.10058s0014
Boechera stricta
Bostr.10058s0014
I
Bostr.3751s0025
Boechera stricta
Bostr.3751s0025
I
Bostr.3751s0030
Boechera stricta
Bostr.3751s0030
I
Bostr.3751s0031
Boechera stricta
Bostr.3751s0031
I
Bostr.3751s0039
Boechera stricta
Bostr.3751s0039
I
Bostr.3751s0043
Boechera stricta
Bostr.3751s0043
I
Bra025607
Brassica rapa
Bra025607
N
Bra025609
Brassica rapa
Bra025609
I
Bra025619
Brassica rapa
Bra025619
N
Bra031864
Brassica rapa
Bra031864
I
Carubv10006654m.g
Capsella rubella
Carubv10006654m.g
I
Carubv10007591m.g
Capsella rubella
Carubv10007591m.g
I
Carubv10015354m.g
Capsella rubella
Carubv10015354m.g
I
fgenesh2_kg.6__2748__AT5G27944.1
Arabidopsis lyrata
fgenesh2_kg.6__2748__AT5G27944.1
N
fgenesh2_kg.6__2751__AT5G27070.1
Arabidopsis lyrata
fgenesh2_kg.6__2751__AT5G27070.1
N
fgenesh2_kg.7__3412__AT5G41200.1
Arabidopsis lyrata
fgenesh2_kg.7__3412__AT5G41200.1
I
fgenesh2_kg.8__2584__AT5G65330.1
Arabidopsis lyrata
fgenesh2_kg.8__2584__AT5G65330.1
I
scaffold_602835.1
Arabidopsis lyrata
scaffold_602835.1
N
scaffold_704060.1
Arabidopsis lyrata
scaffold_704060.1
I
Thhalv10005313m.g
Eutrema salsugineum
Thhalv10005313m.g
I
Thhalv10028184m.g
Eutrema salsugineum
Thhalv10028184m.g
I
Thhalv10028282m.g
Eutrema salsugineum
Thhalv10028282m.g
I