PK11990.1 (Cannabis sativa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 PK11990.1 T299336_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK11990.1
M01290_2.00		 Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.948 0.816
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.948 0.816
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.928 0.763
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.928 0.763
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.884 0.702
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.884 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01290_2.00 NAC/NAM 52 192

DNA Binding Domains

Protein ID Domain From To Sequence
PK11990.1 NAC/NAM 93 233

Links

Other NAC/NAM family TFs
Other Cannabis sativa TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.000
CBG03687 Caenorhabditis briggsae CBG03687 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
CBG16375 Caenorhabditis briggsae CBG16375 I 0.000
CBN03149 Caenorhabditis brenneri CBN03149 N 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN16902 Caenorhabditis brenneri CBN16902 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CJA04414 Caenorhabditis japonica CJA04414 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CJA10576 Caenorhabditis japonica CJA10576 I 0.000
CJA17128 Caenorhabditis japonica CJA17128 N 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE27174 Caenorhabditis remanei CRE27174 I 0.000
CRE27659 Caenorhabditis remanei CRE27659 I 0.000
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.000
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.000
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.000
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.000
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.000
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.000
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.000
L889_g10781 Steinernema feltiae L889_g10781 I 0.000
L889_g16048 Steinernema feltiae L889_g16048 N 0.000
L889_g17146 Steinernema feltiae L889_g17146 I 0.000
L889_g9698 Steinernema feltiae L889_g9698 I 0.000
L889_g987 Steinernema feltiae L889_g987 I 0.000
L892_g10708 Steinernema scapterisci L892_g10708 I 0.000
L892_g8140 Steinernema scapterisci L892_g8140 I 0.000
L892_g8144 Steinernema scapterisci L892_g8144 I 0.000
L892_g8145 Steinernema scapterisci L892_g8145 I 0.000
L892_g8146 Steinernema scapterisci L892_g8146 N 0.000
L893_g2090 Steinernema glaseri L893_g2090 I 0.000
L893_g3450 Steinernema glaseri L893_g3450 N 0.000
L893_g4569 Steinernema glaseri L893_g4569 I 0.000
L893_g9517 Steinernema glaseri L893_g9517 I 0.000
L898_g10723 Steinernema monticolum L898_g10723 I 0.000
L898_g18539 Steinernema monticolum L898_g18539 I 0.000
L898_g28806 Steinernema monticolum L898_g28806 I 0.000
L898_g9580 Steinernema monticolum L898_g9580 I 0.000
MhA1_Contig2502.frz3.gene1 Meloidogyne hapla MhA1_Contig2502.frz3.gene1 N 0.000
NECAME_01500 Necator americanus NECAME_01500 I 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.000
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
PPA10478 Pristionchus pacificus PPA10478 I 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000
PTRK_0000018200 Parastrongyloides trichosuri PTRK_0000018200 N 0.000
scaffold119-EXSNAP2012.21 Pristionchus exspectatus scaffold119-EXSNAP2012.21 N 0.000
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.000
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.000
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.000
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.000
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.000
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.000
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.000
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.000
SPAL_0001578700 Strongyloides papillosus SPAL_0001578700 N 0.000
SSTP_0000309200 Strongyloides stercoralis SSTP_0000309200 N 0.000
SVE_0983600 Strongyloides venezuelensis SVE_0983600 N 0.000