CRE17310 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE17310 T302210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.971 0.771
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE17310 Nuclear receptor 8 77

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29727.m000472 Ricinus communis 29727.m000472 I 0.000
29814.m000741 Ricinus communis 29814.m000741 I 0.000
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.000
Aquca_039_00151 Aquilegia coerulea Aquca_039_00151 N 0.000
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.000
Bo5g136850 Brassica oleracea Bo5g136850 I 0.000
Bo9g177060 Brassica oleracea Bo9g177060 I 0.000
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.000
Bra034165 Brassica rapa Bra034165 I 0.000
Bra034866 Brassica rapa Bra034866 I 0.000
Carubv10001830m.g Capsella rubella Carubv10001830m.g I 0.000
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.000
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.000
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.000
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.000
MDP0000097759 Malus domestica MDP0000097759 N 0.000
MDP0000255104 Malus domestica MDP0000255104 I 0.000
MDP0000281471 Malus domestica MDP0000281471 I 0.000
mgf000047m Mimulus guttatus mgf000047m I 0.000
mgf001239m Mimulus guttatus mgf001239m N 0.000
mgf006505m Mimulus guttatus mgf006505m I 0.000
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
PK20477.1 Cannabis sativa PK20477.1 N 0.000
PK22475.1 Cannabis sativa PK22475.1 N 0.000
Pm013209 Prunus mume Pm013209 I 0.000
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.000
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.000
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.000
Si010246m.g Setaria italica Si010246m.g N 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000
TCM_042467 Theobroma cacao TCM_042467 N 0.000
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.000
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.000
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.000