Pavir.Aa03378 (Panicum virgatum)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Pavir.Aa03378 T316133_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa03378.1.p PLATZ 59 130

Links

Other PLATZ family TFs
Other Panicum virgatum TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29417.m000034 Ricinus communis 29417.m000034 N 0.889
30090.m000247 Ricinus communis 30090.m000247 N 0.806
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.778
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.806
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.806
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N 0.708
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.764
Aquca_030_00325 Aquilegia coerulea Aquca_030_00325 N 0.708
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.847
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.764
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.778
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.958
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.903
Bo2g121040 Brassica oleracea Bo2g121040 N 0.833
Bo3g087070 Brassica oleracea Bo3g087070 N 0.764
Bo7g041160 Brassica oleracea Bo7g041160 N 0.847
Bo9g022400 Brassica oleracea Bo9g022400 N 0.750
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.847
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.764
Bra013149 Brassica rapa Bra013149 N 0.764
Bra014899 Brassica rapa Bra014899 N 0.847
Bra037203 Brassica rapa Bra037203 N 0.750
Bra038403 Brassica rapa Bra038403 N 0.833
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.917
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.931
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.778
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.847
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.764
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.847
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.764
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.861
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.722
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.764
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.764
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.792
Ca_06740 Cicer arietinum Ca_06740 N 0.792
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.722
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.736
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.819
Cla010042 Citrullus lanatus Cla010042 N 0.875
Cla019628 Citrullus lanatus Cla019628 N 0.757
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.875
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.764
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.778
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.778
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.764
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.764
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.819
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N 0.736
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.778
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.778
F775_02274 Aegilops tauschii F775_02274 N 0.875
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.847
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.764
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.744
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.722
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.736
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.778
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.792
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.806
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.750
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.722
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.792
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.819
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.750
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.792
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.764
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N 0.736
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.778
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.764
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.958
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.778
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.764
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.792
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.861
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.847
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.778
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.778
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.931
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.931
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.806
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.889
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.917
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.806
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.875
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.778
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.903
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.708
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.722
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.757
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.743
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.708
MDP0000197021 Malus domestica MDP0000197021 N 0.760
MDP0000639526 Malus domestica MDP0000639526 N 0.778
MDP0000891068 Malus domestica MDP0000891068 N 0.773
mgf020898m Mimulus guttatus mgf020898m N 0.722
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.917
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.778
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.705
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.778
OB02G14750 Oryza brachyantha OB02G14750 N 0.958
OB02G15630 Oryza brachyantha OB02G15630 N 0.778
OBART02G05520 Oryza barthii OBART02G05520 N 0.958
OBART06G24000 Oryza barthii OBART06G24000 N 0.903
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.958
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.901
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.903
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.889
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.903
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.958
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.903
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.958
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.778
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.903
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.736
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.819
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.778
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.903
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.958
OS02G0172800 Oryza sativa OS02G0172800 N 0.958
OS02G0183000 Oryza sativa OS02G0183000 N 0.778
OS06G0666100 Oryza sativa OS06G0666100 N 0.903
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.986
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.778
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.903
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.931
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.792
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.778
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.764
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.917
PK04104.1 Cannabis sativa PK04104.1 N 0.819
Pm010795 Prunus mume Pm010795 N 0.822
Pm027672 Prunus mume Pm027672 N 0.778
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.847
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.861
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.778
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.778
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.764
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.822
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.833
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.833
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.792
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.778
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.958
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.764
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.903
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.764
Si007394m.g Setaria italica Si007394m.g N 0.904
Si018139m.g Setaria italica Si018139m.g N 0.986
Si019544m.g Setaria italica Si019544m.g N 0.778
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.778
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.819
TCM_006017 Theobroma cacao TCM_006017 N 0.847
TCM_016018 Theobroma cacao TCM_016018 N 0.722
TCM_038233 Theobroma cacao TCM_038233 N 0.778
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.833
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.778
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.778
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.944
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.778
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.778
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.931
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.931
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.917
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.778
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.889
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.944
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.819
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.722
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.792
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.736