Bo3g092260 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo3g092260 T319924_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g092260.1 RWP-RK 599 647

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

414 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005309 Aedes aegypti AAEL005309 N 0.000
AAEL013914 Aedes aegypti AAEL013914 N 0.000
AALB007513 Anopheles albimanus AALB007513 N 0.000
Aan_R011791 Calypte anna Aan_R011791 I 0.000
AARA006038 Anopheles arabiensis AARA006038 N 0.000
AATE005479 Anopheles atroparvus AATE005479 N 0.000
ACEP22292 Atta cephalotes ACEP22292 N 0.000
ACHR006951 Anopheles christyi ACHR006951 N 0.000
ACOM038391 Anopheles coluzzii ACOM038391 N 0.000
ACUA004787 Anopheles culicifacies ACUA004787 N 0.000
ACYPI001201 Acyrthosiphon pisum ACYPI001201 N 0.000
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.000
ACYPI34316 Acyrthosiphon pisum ACYPI34316 N 0.000
ADAC004351 Anopheles darlingi ADAC004351 N 0.000
ADIR009189 Anopheles dirus ADIR009189 N 0.000
AEPI008671 Anopheles epiroticus AEPI008671 N 0.000
AFAF015452 Anopheles farauti AFAF015452 N 0.000
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.000
AFUN010952 Anopheles funestus AFUN010952 N 0.000
AGAP004789 Anopheles gambiae AGAP004789 N 0.000
AGAP004791 Anopheles gambiae AGAP004791 N 0.000
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.000
AMIN008132 Anopheles minimus AMIN008132 N 0.000
AQUA002593 Anopheles quadriannulatus AQUA002593 N 0.000
ASTEI08088 Anopheles stephensi ASTEI08088 N 0.000
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.000
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.000
CapteG155070 Capitella teleta CapteG155070 I 0.000
Cflo_07151--XP_625193.1_APIME Camponotus floridanus Cflo_07151--XP_625193.1_APIME N 0.000
CLEC002862 Cimex lectularius CLEC002862 I 0.000
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.000
CPIJ004396 Culex quinquefasciatus CPIJ004396 N 0.000
CpipJ_CPIJ004396 Culex pipiens CpipJ_CPIJ004396 N 0.000
DAPPUDRAFT_189566 Daphnia pulex DAPPUDRAFT_189566 N 0.000
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.000
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.000
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.000
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.000
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.000
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.000
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.000
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.000
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.000
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.000
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.000
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.000
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.000
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.000
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.000
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.000
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.000
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.000
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.000
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.000
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.000
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.000
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.000
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.000
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.000
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.000
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.000
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.000
GB41600 Apis mellifera GB41600 I 0.000
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.000
HMEL017569 Heliconius melpomene HMEL017569 I 0.000
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.000
HMG20A Bos taurus ENSBTAG00000020441 I 0.000
HMG20A Canis familiaris ENSCAFG00000018061 I 0.000
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.000
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.000
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.000
hmg20a Danio rerio ENSDARG00000031198 I 0.000
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.000
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.000
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.000
HMG20A Echinops telfairi ENSETEG00000015812 I 0.000
HMG20A Felis catus ENSFCAG00000022539 I 0.000
HMG20A Homo sapiens ENSG00000140382 I 0.000
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.000
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.000
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.000
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.000
HMG20A Microcebus murinus ENSMICG00000011025 I 0.000
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.000
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.000
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.000
Hmg20a Mus musculus ENSMUSG00000032329 I 0.000
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.000
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.000
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.000
hmg20a Oryzias latipes ENSORLG00000001794 I 0.000
HMG20A Procavia capensis ENSPCAG00000013879 I 0.000
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.000
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.000
HMG20A Sus scrofa ENSSSCG00000001871 I 0.000
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.000
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.000
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.000
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.000
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.000
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.000
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.000
KGM_20768 Danaus plexippus KGM_20768 N 0.000
L798_15457 Zootermopsis nevadensis L798_15457 I 0.000
LDEC005234 Leptinotarsa decemlineata LDEC005234 N 0.000
LotgiG196090 Lottia gigantea LotgiG196090 I 0.000
MCINX003064 Melitaea cinxia MCINX003064 I 0.000
MDOA010382 Musca domestica MDOA010382 N 0.000
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.000
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.000
NV11068 Nasonia vitripennis NV11068 I 0.000
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.000
PPAI006828 Phlebotomus papatasi PPAI006828 N 0.000
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.000
RPRC008043 Rhodnius prolixus RPRC008043 I 0.000
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.000
SINV20852 Solenopsis invicta SINV20852 N 0.000
SMAR002604 Strigamia maritima SMAR002604 I 0.000
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.000
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.000
Tal_R006697 Tyto alba Tal_R006697 I 0.000
TC009230 Tribolium castaneum TC009230 N 0.000
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.000
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.000
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.000